Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0499 ATGAGTACTCATCCCTATTTCTCCAATGACTTCAATGGTTATTGGTTTGACCTAAATAACCCTCCATTCTATAACTTTCCTTCTAGTAACAACATCTCTTTTGCATCTTCTTCTCCTTCATCTCCACCTCCAAGAGAAGCTCTTCCTTTACTTAACCTAAGCCCTACAAAACATGAAGATCTTCTAGAATCTTCCTTTAGTTCCATGGAAGTGATGAATATGAAGGAGAAAGAAGTAAGTATATCATCAAATTCTTTAGATGATGATGCTGTTACTGTGGCTTTGCATTTAGGGCTTCCAAGTATAAGTTCATCTGATTTAGCTTCTTCAAATATTTACAAAGATGATGAAAAAGTAGTGACTACTGTTGATTCTTCTGAGTGTCCACCAAATAAAATTAATAGGGGTCAGTATTGGATCCCTACCCCTGCTCAGATTCTAATTGGTCCAACACAGTTTTCATGCCCTCTTTGTTTCAAGACCTTCAATAGATACAACAACATGCAGATGCATATGTGGGGACATGGATCACAATATAGAAAGGGACCAGAATCTCTAAGAGGAACACAACCAACAGCAATGCTAAGACTCCCATGTTATTGTTGTGCACCTGGATGCAAGAACAACATTGATCATCCAAGAGCAAAACCATTGAAAGATTTTAGAACACTTCAAACACATTACAAGAGAAAGCATGGAATAAAACCATTTATGTGTAGAAAGTGTTGCAAAGCATTTGCGGTAAGAGGTGATTGGAGAACTCACGAGAAAAACTGTGGAAAACTTTGGTATTGTTGTTGTGGGTCCGATTTTAAGCACAAAAGATCACTAAAAGATCATATCAAGGCATTTGGAAATGGACATAAAGCTTATGGAATTGACGAATTATGTCTTGATCAAGATGATGAATTAGAACATGGTGGTGGCTCTGAAATTGAGCAAGAAAATGAATCTTTTCAGTCATAA 966 0.3685 MSTHPYFSNDFNGYWFDLNNPPFYNFPSSNNISFASSSPSSPPPREALPLLNLSPTKHEDLLESSFSSMEVMNMKEKEVSISSNSLDDDAVTVALHLGLPSISSSDLASSNIYKDDEKVVTTVDSSECPPNKINRGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCCCGSDFKHKRSLKDHIKAFGNGHKAYGIDELCLDQDDELEHGGGSEIEQENESFQS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0499 321 PANTHER ZINC FINGER PROTEIN WIP2 28 320 IPR043584 GO:0003700|GO:0010468
Mal4g0499 321 Gene3D Classic Zinc Finger 215 294 - -
Mal4g0499 321 ProSitePatterns Zinc finger C2H2 type domain signature. 155 175 IPR013087 -
Mal4g0499 321 PANTHER TESTA 1 PROTEIN, PUTATIVE-RELATED 28 320 - -
Mal4g0499 321 ProSiteProfiles Zinc finger C2H2 type domain profile. 153 180 IPR013087 -
Mal4g0499 321 SUPERFAMILY beta-beta-alpha zinc fingers 219 257 IPR036236 -
Mal4g0499 321 Gene3D Classic Zinc Finger 152 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0499 Mal-Chr4 4718997 4721493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0499 6 314 C2H2 Transcription Factor Family AT1G51220 61.728 8.35e-134 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal4g0499 None None None