Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0493 ATGGGCTCAAACAACTGGCTTTCATTTCCACTTTCTCCAACTCATCATCCTTCATTACCACCTCATCTTCAACCAACTCAATCTCATCATCATCATCACTTTTCTCTTGGGACATTAGTCAATGATAACATGTTGGAAACACCTTTCCATAATCATGATTGGAATCTGATGAGTACTCACAGTCACAGCAGCAACGAAGTTCCAAAGGTTGCAGATTTTCTTGGTGTGAGCAGCAAGAGTACTGAAAATGAGTCAGATCTTGCAGCCTTTAATGAAATTAATAACTCAAATCATCATTCTAATTTAGATAATTACTTGTTCATGCCGGCAACTTCTAGCAACAACTATGATCAATATGAAGAAAATGCTAACAATAATCTGCAGTCATTGACATTATCAATGGGAAGTGGTACTACTAAGGATTCCACATGTGAAACTAGTGGTGATAATAATAATAATAATAATAGTACTAACAGTACCGTTGAAGCAGCTGCAACACCTAGAAGAGCTTTGGATACCTTTGGCCAAAGAACATCAATATATCGTGGTGTAACAAGACATAGATGGACTGGAAGGTATGAAGCTCACCTTTGGGATAATACCTGTAGAAGGGAAGGACAATCAAGAAAAGGTCGCCAAGTTTATTTAGGTGGTTATGACAAAGAAGAGAAAGCAGCGAGGGCATATGATTTAGCTGCACTAAAGTATTGGGGGACATCTACCACTACAAATTTTCCCATCAGTAACTATGAGAAGGAAGTTGAAGATATGAAGCACATGACAAGACAAGAATTTGTTGCCGCCATAAGAAGAAAAAGCAGTGGATTTTCAAGGGGTGCATCAATGTATCGTGGAGTCACAAGGCATCATCAACATGGAAGATGGCAAGCAAGAATTGGCAGAGTTGCTGGAAACAAAGATCTTTACTTAGGAACTTTCAGTACTGAGGAAGAAGCTGCAGAAGCATATGACATAGCTGCAATAAAGTTCAGAGGATTAAACGCAGTTACAAACTTTGACATGAATCGTTATGACGTGAAAGCGATTCTTGAGAGTAACACTTTGCCAATAGGAGGAGGTGCTGCAAAAAGATTAAAAGAAGCTCAAGCTCTAGAATCTTCAAGAAAAAGGGAACAAGAGATGATAGCACTTGCAGGCTCTAATTTTCAATACGCAGGAGGAGGTTCTTCAAGTTCAAGTAGGATGCAATTACAAGGTTACCCTTTAATGCAATTTGAACAAACACAACAACAACAACAACCTTTGTTAACACTACAGAATCTATATGATAGTAGTACTCAAGATACTGCATCGTTTGATCAGAGTTATATACAAACTCAGCTTCAGTTACAGCAAAGTGGAATGTATAACTATAATGGTAATTACATGCAGAATCACACGGGTTTGATGAATTTAGGAGGTGTGATGGAGAATAATGGTGATGGTGGAGGGTATAATAGTAATGTGATTGGAATGAGTAATACCAACGTTGTAGGGGGGGAGGAGGTTGGGTATGTTAAGGTTGATTATGACATGCCTTCCGGAGGTTATGGAGGTTGGTCTGCGGCGGATGGTGCAAATGGTGGTGGTGGTGTTTTTACAATGTGGAATGATTTGACAAATTAA 1626 0.3893 MGSNNWLSFPLSPTHHPSLPPHLQPTQSHHHHHFSLGTLVNDNMLETPFHNHDWNLMSTHSHSSNEVPKVADFLGVSSKSTENESDLAAFNEINNSNHHSNLDNYLFMPATSSNNYDQYEENANNNLQSLTLSMGSGTTKDSTCETSGDNNNNNNSTNSTVEAAATPRRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNTCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGTSTTTNFPISNYEKEVEDMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMNRYDVKAILESNTLPIGGGAAKRLKEAQALESSRKREQEMIALAGSNFQYAGGGSSSSSRMQLQGYPLMQFEQTQQQQQPLLTLQNLYDSSTQDTASFDQSYIQTQLQLQQSGMYNYNGNYMQNHTGLMNLGGVMENNGDGGGYNSNVIGMSNTNVVGGEEVGYVKVDYDMPSGGYGGWSAADGANGGGGVFTMWNDLTN* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0493 541 SUPERFAMILY DNA-binding domain 281 341 IPR016177 GO:0003677
Mal4g0493 541 CDD AP2 281 340 IPR001471 GO:0003700|GO:0006355
Mal4g0493 541 PRINTS Ethylene responsive element binding protein signature 322 342 IPR001471 GO:0003700|GO:0006355
Mal4g0493 541 PRINTS Ethylene responsive element binding protein signature 181 192 IPR001471 GO:0003700|GO:0006355
Mal4g0493 541 SUPERFAMILY DNA-binding domain 179 248 IPR016177 GO:0003677
Mal4g0493 541 Gene3D AP2/ERF domain 282 342 IPR036955 GO:0003700|GO:0006355
Mal4g0493 541 Gene3D AP2/ERF domain 180 248 IPR036955 GO:0003700|GO:0006355
Mal4g0493 541 CDD AP2 179 248 IPR001471 GO:0003700|GO:0006355
Mal4g0493 541 ProSiteProfiles AP2/ERF domain profile. 282 340 IPR001471 GO:0003700|GO:0006355
Mal4g0493 541 ProSiteProfiles AP2/ERF domain profile. 180 246 IPR001471 GO:0003700|GO:0006355
Mal4g0493 541 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 5 536 - -
Mal4g0493 541 SMART rav1_2 282 346 IPR001471 GO:0003700|GO:0006355
Mal4g0493 541 SMART rav1_2 180 252 IPR001471 GO:0003700|GO:0006355
Mal4g0493 541 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 536 - -
Mal4g0493 541 Pfam AP2 domain 283 332 IPR001471 GO:0003700|GO:0006355
Mal4g0493 541 Pfam AP2 domain 180 238 IPR001471 GO:0003700|GO:0006355
Mal4g0493 541 MobiDBLite consensus disorder prediction 134 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0493 Mal-Chr4 4635366 4638551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0493 1 538 AP2-EREBP Transcription Factor Family AT1G51190 61.735 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Mal4g0493 AP2 9.6e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0493 K09285 - gmx:100788471 643.269