Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0490 ATGGATTCTTCAATTGTAATAGCAAACACAATTCAAGACCCTAATAATGAAATGGAATTTGAATCACATGAAGCTGCATATTCATTTTACAAAGAATATGCAAAATCAGCAGGGTTTGGTACTGCTAAGTTAAGTAGTCGTCGGTCTAGGGCATCGAAAGAATTCATCGATGCGAAATTTTCGTGTATAAGATATGGTAATAAACAACAATCGGATGACGCAATTAATCCGCGCCCTTCGCCGAAAATTGGCTGTAAAGCAAGTATGCATGTGAAGAGAAGACACGATGGTAAATGGTATGTTTATAGTTTTGTTAAGGAGCATAATCATGAGCTTTTACCTGCTCAAGCTCATTTTTTTCGGAGTCATAGGAATTCGGATTTGCTTGGTAATGATGTTCGGATGAGACGGAGGAAGAATTCGACTGCAGGTGGTGGTAAGTTGTTTAGCGCGTATCAGAATGTTGATTGTTTGGAGAATTTTATGAATCGTCAACATGATAAAGGGCGGAGTTTGGTTTTAGAACCGGGGAATGCTCAATTGCTTCTTGAGCTTTTCATGCATATGCAGGAAGAGAATCCTAAATTCTTTTATGCGGTTGATTTGAATGAAGAGCATCGGCTTAGAAATGTGTTTTGGGTTGATTCTAAAGGGTTGGAGGATTTTGGCTATTTCACTGATGTTGTTTCTTTTGACACAACGTATTTCACAAGCAAGTATAAGATACCGTTGGTGCTTTTTATTGGAGTTAACCATCATGTTCAACCGACATTGCTTGGATGTGCGTTGATAGCTGATGAGACTGTATTTACTTTTGCATGGTTACTGCAAACATGGTTTGTGGCAATGGGTGAACGTGCTCCACAAGTGATTCTGACTGACCAAAACGATGCTATTAAAGCTGCTGTCGCTGCTGTTTTTCCAGGATCGCGTCATTGTTTTTGTTTGTGGCATGTTTTGGAAAAGATACCAAAACAGCTTGAATTTTTAAGTGCATGGCATGATAGCTTTATGAAAAAGTTCAACAAATGTATATATCAATCATGGACAGAGGAGCAATTTGAAAGGAGATGGTGGAAGCTGGTTGATAGGTTTAAACTTAGAGATGTTAAGTGGTTCCAAACCTTGTATGATGATCGCGCATGTTGGGTGCCGATGTTTATGAGGGATATTTCTTTTGCTGGCTTGTCTACTGGCTCGCGCTCTGAAAGTTTAAATTCTCTTTTTGACAAATATATCCAAGTTGATACTTCATTAAGACAATTTATAGAACAGTACCAACTGATTCTTGAAGATAGAGATGAAGAGGAAGCCAAAGCAAATTTTGATGCTTGGCATGAAACACCTGAATTAAAGTCTCCTTCCCCTTTTGAAAAACAATTGTTGTTAGTTTATACGCATGAAATCTATCAAAAGTTTCAGTTTGAGGTTTTGGGTGCTTCTGCTTGCCATCTAAAGAAAGAAAATGATGGTGTGATTACTACTTATGATGTTAAAGACTTCGAAAATCATCAGAACTACATGGTAGAATGGAACACATCAAACTCAGATATATGTTGTTCCTGTCACTTGTTTGAATATAAAGGTTACCTATGTAGACATGCAATTGTCGTTTTACAAATGTCTGGTGTTTTTAGCATCCCGCCAAAGTATGTATTGAAAAGATGGACAAATGCTGCTTTAAGTAGGTATCCTATTGGTGAAAAATTGGAAGAGGTTCAATCCAAGGTCAGGAGATTCAATGATTTGTGTAGACGAGCCATAATTTTGGGTGAAGAAGGTTCTTTATCCCAAGAAAGTTACTATATGGCTTTAGGTGCCTTAAGTGAAGCTCTAAAGCAATGTGCAAATCTGAACAACTCCGTTGAGAATGCAGCCGCTACCCATATTGGTTGCAGTGTTGAAGAAGAGTATCAATCTATTATACCATCTAATGATAAGGTCTCCGATCCCCAAATGAATACGAGTAAGAAGGCTCCAAGGACTGGTATAGCTGGTAGGAGTCTAGGAAGTGTTGAAGGAAGTAAGGGAAAGGTGCCTCAGCTTGGAGCAGTAAGTGGTTGTAACGATGGCTTTCAACAAATGGTTTATTTGCCCCAAAATTAA 2106 0.3837 MDSSIVIANTIQDPNNEMEFESHEAAYSFYKEYAKSAGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDAINPRPSPKIGCKASMHVKRRHDGKWYVYSFVKEHNHELLPAQAHFFRSHRNSDLLGNDVRMRRRKNSTAGGGKLFSAYQNVDCLENFMNRQHDKGRSLVLEPGNAQLLLELFMHMQEENPKFFYAVDLNEEHRLRNVFWVDSKGLEDFGYFTDVVSFDTTYFTSKYKIPLVLFIGVNHHVQPTLLGCALIADETVFTFAWLLQTWFVAMGERAPQVILTDQNDAIKAAVAAVFPGSRHCFCLWHVLEKIPKQLEFLSAWHDSFMKKFNKCIYQSWTEEQFERRWWKLVDRFKLRDVKWFQTLYDDRACWVPMFMRDISFAGLSTGSRSESLNSLFDKYIQVDTSLRQFIEQYQLILEDRDEEEAKANFDAWHETPELKSPSPFEKQLLLVYTHEIYQKFQFEVLGASACHLKKENDGVITTYDVKDFENHQNYMVEWNTSNSDICCSCHLFEYKGYLCRHAIVVLQMSGVFSIPPKYVLKRWTNAALSRYPIGEKLEEVQSKVRRFNDLCRRAIILGEEGSLSQESYYMALGALSEALKQCANLNNSVENAAATHIGCSVEEEYQSIIPSNDKVSDPQMNTSKKAPRTGIAGRSLGSVEGSKGKVPQLGAVSGCNDGFQQMVYLPQN* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0490 701 Coils Coil 608 628 - -
Mal4g0490 701 SMART 26again6 518 545 IPR006564 GO:0008270
Mal4g0490 701 Pfam FAR1 DNA-binding domain 28 114 IPR004330 -
Mal4g0490 701 Pfam SWIM zinc finger 513 541 IPR007527 GO:0008270
Mal4g0490 701 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 696 IPR031052 GO:0006355
Mal4g0490 701 ProSiteProfiles Zinc finger SWIM-type profile. 507 543 IPR007527 GO:0008270
Mal4g0490 701 PANTHER PROTEIN FAR1-RELATED SEQUENCE 4 2 696 - -
Mal4g0490 701 MobiDBLite consensus disorder prediction 644 661 - -
Mal4g0490 701 Pfam MULE transposase domain 228 321 IPR018289 -
Mal4g0490 701 MobiDBLite consensus disorder prediction 644 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0490 Mal-Chr4 4576027 4578683 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g0490 MULE 2.6e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0490 - - gmx:100805273 1212.59