Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0489 ATGGAGTCAGATCTTCATCAACAACAACAACCACAGATGAATTCTTCAGGTTTAACACGTTTCAAATCAGCACCAAGTTCATATTTCAACAACATCATTGACAGAGAATTCTACGAGCATGTTTTCAATAAACCATCAAGTCCAGAAACAGAGCGAGTTTTTTCAAGGTTTATGAGCAGTTTAGGTTCAGAAGATGATTTACTAGCTCAAAAAATCTCAGCAGATTCAACAGTGAAAGAAGAAGAAGAGGTTAACATTAATCAACAACAACAAGATCAGGGTTTGGTTTCAGTCAACAATGAACATGTGGTTCATCAGCAGAGTAATATCAGTATCAATATCAGTAACAATTATAACAACTCTGTTCCTTCTTCTCATGGTTTTTACCAAAACTCTATGATGCCACCTTTGCCAAATCAAAATGTTTCTTCTGGTTTGGATGGAAATTTTTCAATGGGAGTTAATCGGTTGCAGCAGATGAAGAATCATGGTGGAAATAATTCTAATCTTATTAGACATAGTAGTTCACCAGCAGGATTATTTTCTCAGATTAACATTGAAAATGGGTATGTTAGTATGAGAGGAATGGGAACTTTAGGAGCTGTGAATAACTCTATCAAAGAAGCAAAATTTTCTAATGCAAGGAGTTTGAAGAATCAATCAAACTATTCATCAGGGTTAATGTCAACAATAGCTGAAAATGGTGACAAAGGCAATAGAGAAAATAATCAAGAAATTGAAGCTTTTGGTGAAAGTCACGGTAACGAATATATGGATTATCAAGTTGATACTTGGGATGATTCTGAGATGATGTCTGAAAATGTTGGTGGTTTAAAAAGATTTAGAGAGGATGATTCAAAACAACAATTTTCTGGTTTAAATGTTCAGAATGAAACAGGAGGAGGGCATTCTAATTCTCCTTTGGCTCATCAATTGAGTATGCCAAATACTTCATCTGAAATGGCAGCTATGGAGAAGTTTCTGCATTTCTCAGATTCTACTCCGATGAAAATTCGTGCCAAGCGAGGTTGTGCAACTCACCCAAGAAGCATTGCAGAAAGAGTTAGAAGGACTAAAATTAGTGAGCGTATGAGGAAGCTACAAGATCTAGTCCCAAACATGGATAAGCAAACAAACACAGCAGATATGTTGGACTTGGCTGTGGATTACATCAAAGACCTTCAAAAGCAAGCTCAGAAGCTTCAAGATTGTCAAGCAAAGTGTACGTGCCCACACAAGCAACAACAATAG 1251 0.3645 MESDLHQQQQPQMNSSGLTRFKSAPSSYFNNIIDREFYEHVFNKPSSPETERVFSRFMSSLGSEDDLLAQKISADSTVKEEEEVNINQQQQDQGLVSVNNEHVVHQQSNISINISNNYNNSVPSSHGFYQNSMMPPLPNQNVSSGLDGNFSMGVNRLQQMKNHGGNNSNLIRHSSSPAGLFSQINIENGYVSMRGMGTLGAVNNSIKEAKFSNARSLKNQSNYSSGLMSTIAENGDKGNRENNQEIEAFGESHGNEYMDYQVDTWDDSEMMSENVGGLKRFREDDSKQQFSGLNVQNETGGGHSNSPLAHQLSMPNTSSEMAAMEKFLHFSDSTPMKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQAQKLQDCQAKCTCPHKQQQ* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0489 416 Gene3D - 345 415 IPR036638 GO:0046983
Mal4g0489 416 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 6 413 - -
Mal4g0489 416 MobiDBLite consensus disorder prediction 1 21 - -
Mal4g0489 416 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 347 408 IPR036638 GO:0046983
Mal4g0489 416 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 344 394 IPR011598 GO:0046983
Mal4g0489 416 SMART finulus 350 400 IPR011598 GO:0046983
Mal4g0489 416 Pfam Helix-loop-helix DNA-binding domain 349 395 IPR011598 GO:0046983
Mal4g0489 416 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 6 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0489 Mal-Chr4 4560958 4563477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0489 6 410 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 38.517 7.16e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal4g0489 HLH 5.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0489 - - gmx:100806368 504.982