Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0486 ATGGATAACAGAGACAAAGGCACGGAGAAGCCGAAGAGAAAAAAAAGTGTCCGTGAAATTCTTCGAGATATTAGTAATCTTGATAAGAATCTGATTGCAAGCGTCATCCAAAGGAACTTGCCAGCTCCAGCAGTGACAAACCCTATACCAGAGTTACAAGTCCCAGCTAATTATAATCAAGGAGTTGCACTAAGGAATCAAAATGTTGCTGATGATTGGACTCCCAAGCCAAATCCTGTGATTGTAGATCTGGTTAGTTCTGAATCAGGAGAGAAAATTGATTTAGTTCCTAAAAAAAAGTGCATGAGGGAGGACCAGATTCCGAATTCACCACCTGCTACAAAACGCAAGAAAGCTCGCGGAATCTTGATTGAGCCCGAGGGTCATGCTGTTGACAGGGATGCAGATGATTTCATTAATAATTTGGCAGCAGATGAATATCTTGATGAACTATACAATTTCTACAAGCTAACAGAGAATGAGGATAGAGCTTCAAAATACATGCAATCACAGAAGGAAATCAATATGAATATGAGGACTATTGTTGTGGACTGGCTAGTCGAAGCTCATCGTCATTTTAATTTGAAGACAGAGACACTCTTTCTAACAGTTAGCATACTTGATAGATACCTCTCATTGATTAATATACCTAAAATAGACCTACAGTTAGTGGGAGTATGCTCAATGTCCTTAGCTGCCAAATTTGAAGAAGTAACTTATCCTGAGGTAAATCAATGGTTGGGAATATCAGCTAATGCTTATAACAGACACCAGTTTATTGCAATGGAGACCGATATTGTTGAAAAGATACAATGGAATTTAACAGTTCCTACACCCTATGTATTTTTAGTACGACTTATCGGTGCATCTCTTATGCCAGATAAAGAGTTGGAGAACATGGCATATTACCTAGCAGAACTTGCTCTTGTAAATTATAATGTCATGGTTTCATTCCCTCCATCAAAGATTGCTGCAGCAGCTTTTTACTCAGCTCGTTGTATACTCAATAGGATTCAATATTGGACTCCATATCTACACAAACTAACTGGTTACTCCAAAGAAGACATCAAATTTTGTGCCATGATAATAGTGTGGATACACCAAATTGCAACAACAGATGATAAAATCAAATCATTGTACAACAAATTCTCAAGTCCTAGGAAAGGTTACATTGCTCTCTTACCACAGCCACATAACATCCAACAAATATTGTAG 1215 0.3794 MDNRDKGTEKPKRKKSVREILRDISNLDKNLIASVIQRNLPAPAVTNPIPELQVPANYNQGVALRNQNVADDWTPKPNPVIVDLVSSESGEKIDLVPKKKCMREDQIPNSPPATKRKKARGILIEPEGHAVDRDADDFINNLAADEYLDELYNFYKLTENEDRASKYMQSQKEINMNMRTIVVDWLVEAHRHFNLKTETLFLTVSILDRYLSLINIPKIDLQLVGVCSMSLAAKFEEVTYPEVNQWLGISANAYNRHQFIAMETDIVEKIQWNLTVPTPYVFLVRLIGASLMPDKELENMAYYLAELALVNYNVMVSFPPSKIAAAAFYSARCILNRIQYWTPYLHKLTGYSKEDIKFCAMIIVWIHQIATTDDKIKSLYNKFSSPRKGYIALLPQPHNIQQIL* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0486 404 SMART Cyclin_C_2 277 397 IPR004367 -
Mal4g0486 404 ProSitePatterns Cyclins signature. 179 210 IPR006671 -
Mal4g0486 404 Gene3D - 270 403 - -
Mal4g0486 404 SUPERFAMILY Cyclin-like 142 274 IPR036915 -
Mal4g0486 404 SUPERFAMILY Cyclin-like 278 399 IPR036915 -
Mal4g0486 404 Coils Coil 403 404 - -
Mal4g0486 404 CDD CYCLIN 275 364 IPR013763 -
Mal4g0486 404 SMART cyclin_7 281 365 IPR013763 -
Mal4g0486 404 SMART cyclin_7 184 268 IPR013763 -
Mal4g0486 404 Gene3D - 163 269 - -
Mal4g0486 404 PANTHER CYCLIN-B1-4 15 396 - -
Mal4g0486 404 PANTHER CYCLINS 15 396 IPR039361 -
Mal4g0486 404 Pfam Cyclin, C-terminal domain 277 396 IPR004367 -
Mal4g0486 404 Pfam Cyclin, N-terminal domain 152 275 IPR006671 -
Mal4g0486 404 CDD CYCLIN 178 267 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0486 Mal-Chr4 4526868 4529712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0486 131 395 Core Cell Cycle Gene Families AT2G26760 43.774 8.28e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0486 K21777 - twl:120008028 295.434