Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0454 ATGGGGTTCTCAAGAAAACAATTCTCAAACTACCTTTTGAATACTATACTATTTGAGGTTGTTGTCTTTTCATGGTTATGGTTACATGTTACAAGTCTTGGTTCCATGTCATCAATTGCTGTCTCTTATGGAGATAAAGGTTCTGCTTTCTGTGGCTTGAAATCAGATGGATCTCACACTGTGACATGCTATGGAATGAACTCAGCCATAGTTTATGGAACACCATCTCAGTTTCCATTCCTTGGTTTAACTTCTGGTGATGGTTTTGTTTGTGGACTTTTAATGAGTTCAAATCAACCATATTGCTGGGGGAGTAGTAGCCATATAGAAATGGGTGTGCCACAACCTATGTTTAAGGATGCTCAGTACTTAGAAATCAGTGCCGGCGATTATCATGTTTGTGGATTGAGGAAACCTTTGACAGGAAGACATAGGAACACTTCTTTTGTTGACTGTTGGGGCTACAACATGACAAAGAACTATGTGTTTGATGGACAGATTCAATCGATTTCGGCGGGTTCTGAGTTCAATTGTGGACTATTTTCGCAGAATAGGACGGTTTTTTGTTGGGGTGCTGAGGTTAGTACTCAAGTTATAAGGTTGATTCCACAAGGTATGAGATTTCAGAAGGTGTCTTGTGGAGGGTATCATGTATGTGGAATATTGGAAGGTGTGAATTCTAGAACTGTTTGTTGGGGGAGGAGTTTGGATTTGGAGGAAGAAATTTCATTGATACCTAATCAAGGACAAGGTGGCAATGTTGAGTTGGCTCCAAGTGATCCTATGCTTTCTGTTGTTGGAGGAAAGTTTCATGCTTGTGGAATTAAGAGTTATGATCATGGTGTGATTTGTTGGGGATTAAGTTTGAAAACAAGCACAAAAGTTCCTAAAGGGATTAAAGTGTTTGAAATTGCTGCTGGTGATTATTTTACCTGTGGAATTCTTGCTGCAAAATCTCTTGAGTCTATTTGTTGGGGTGTTGGGTTTCCAACTTCTCTACCTTTGGCTGTTTCACCAAGAGCAAGAAAGTGTTTGTCTGCACCTTGTCCTCCAAGTTACTATGAAATTGAAAAGGATCAACAAAATAGTCTAATTTGTCAGGATCCAAATTCTCACCTTTGTGTTCCATGCAGTGGTGTTTGTCCTGATGAAATGTATCAGAAAAGTGGTTGCAATTTGAAATCTGATATATTATGTGAATATAATTGTTCTGTTTGTTCTTCAACTGAATGCTTCTCAAACTGTTCCTCCTCCTCTTCTTCCAATGCTGCTAATGGTGGGAAGAAAAATGAAAGATTTTGGTCTGTGCAGTTGATAATTGTTGTTGCTGAGATAGTATTTGCTGTTTTTATAATTAGTGCTGTGTCTATAACCGCGGTTATGTACGTTCGCTACAAGCTGAGAGATTGTGAGTGTTCAACAAGGCCGTTAAACTCGGTGAAGAGACTCAATGTTAGTTCTTCGGTTCAAAAGGATAATGGTAAGGTTCGACCAGACGCGGAGGAGATCAAGATAAGGAGGGCTCAGAAGTTCTCCTATGAGGAACTTGAAAATGCAACTTGTGGATTCAAAGAAGAATCAATAGTAGGGAAAGGAAGTTTTTCATGTGTGTTCAAAGGTGTTCTCAAAGATGGAACTGTTGTTGCTGTTAAAAGGGCTATTATGTCTCCAAACATGCAGAAAAATTCCAAAGAGTTTCACACAGAACTTGACTTGTTATCTAGGTTGAACCATGCTCATTTGCTCAACCTATTAGGCTATTGTGAAGAAGGTGGTGAAAGACTACTTGTTTATGAGTACATGGCTCATGGATCATTGCATCAACATCTTCATGGCAAAAGCAAAGAGTTGAAAGAGCAATTGGATTGGATCCGAAGGGTAACAATCGCCGTCCAAGCAGCTCGAGGAATCGAGTATCTCCACGGCTACGCGTGTCCACCGGTGATTCATAGAGATATTAAATCTTCAAACATACTCATTGATGAAGAACACAATGCTAGAGTTTCGGATTTCGGTTTATCGCTACTAGGTCCAACAGATAGCAGCTCCCCTCTGGCCGAGTTACCGGCCGGAACACTCGGTTATCTTGATCCTGAATACTATAGACTTCACTACCTAACAACAAAATCAGATGTTTATAGCTTTGGTGTTCTACTATTAGAAATTCTAAGTGGTAGAAAAGCTATTGATATGCAATATGAAGAAGGTAACATTGTTCAATGGTCAGTTCCATTAATAAAATCAGGTGAAATAGCTTCAATTTTAGACCCTTGTTTGAAACCACCTTCTGATATTGAAGCATTGAAGAGGATAGCTAATGTTGCTTGTAAATGTGTAAGAATGAGAGGTAAAGATAGACCTTCAATGGACAAAGTAACAACAAGTTTGGAAAGAGCTTTAGCAATGTTAATGGGAAGTCCTTGTATTGATCAACCAATTTTGCCAACTGAAGTTGTTTTAGGAAGTAATAGAATGCATAAGAAAACATCTCAAAGGTCTTCGAATCGGTCGGCTTCGGAAATCGATGTAGTTGAAGGTGAAGATCAAAGGTTTGAGTTTAGAGCACCTTCTTGGATTACTTTTCCAAGTGTTACTTCTTCTCAAAGGAGAAAGTCTTCAGGATCAGAAGGTGAAGTTGAAGTGAAGATCGTTGAAGGAAGAAACTTTGGTAATATTGTTAGTGGTGGTGGAGGTGATGTTTTGAGAAGTCTTGAGGAAGAAATTGGTCCTGCTTCTCCTCAAGAGAGACTCTTCTTGCAACACAACTTCTAA 2772 0.3921 MGFSRKQFSNYLLNTILFEVVVFSWLWLHVTSLGSMSSIAVSYGDKGSAFCGLKSDGSHTVTCYGMNSAIVYGTPSQFPFLGLTSGDGFVCGLLMSSNQPYCWGSSSHIEMGVPQPMFKDAQYLEISAGDYHVCGLRKPLTGRHRNTSFVDCWGYNMTKNYVFDGQIQSISAGSEFNCGLFSQNRTVFCWGAEVSTQVIRLIPQGMRFQKVSCGGYHVCGILEGVNSRTVCWGRSLDLEEEISLIPNQGQGGNVELAPSDPMLSVVGGKFHACGIKSYDHGVICWGLSLKTSTKVPKGIKVFEIAAGDYFTCGILAAKSLESICWGVGFPTSLPLAVSPRARKCLSAPCPPSYYEIEKDQQNSLICQDPNSHLCVPCSGVCPDEMYQKSGCNLKSDILCEYNCSVCSSTECFSNCSSSSSSNAANGGKKNERFWSVQLIIVVAEIVFAVFIISAVSITAVMYVRYKLRDCECSTRPLNSVKRLNVSSSVQKDNGKVRPDAEEIKIRRAQKFSYEELENATCGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEYMAHGSLHQHLHGKSKELKEQLDWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPTDSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVQWSVPLIKSGEIASILDPCLKPPSDIEALKRIANVACKCVRMRGKDRPSMDKVTTSLERALAMLMGSPCIDQPILPTEVVLGSNRMHKKTSQRSSNRSASEIDVVEGEDQRFEFRAPSWITFPSVTSSQRRKSSGSEGEVEVKIVEGRNFGNIVSGGGGDVLRSLEEEIGPASPQERLFLQHNF* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0454 923 Pfam Protein tyrosine and serine/threonine kinase 526 795 IPR001245 GO:0004672|GO:0006468
Mal4g0454 923 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 98 139 IPR000408 -
Mal4g0454 923 PANTHER RECEPTOR-LIKE KINASE 8 923 - -
Mal4g0454 923 Gene3D - 83 375 IPR009091 -
Mal4g0454 923 SUPERFAMILY Protein kinase-like (PK-like) 504 796 IPR011009 -
Mal4g0454 923 SUPERFAMILY RCC1/BLIP-II 31 286 IPR009091 -
Mal4g0454 923 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 8 923 - -
Mal4g0454 923 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 348 399 IPR001368 GO:0005515
Mal4g0454 923 SMART serkin_6 523 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0454 923 Gene3D Transferase(Phosphotransferase) domain 1 601 804 - -
Mal4g0454 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Mal4g0454 923 ProSiteProfiles Protein kinase domain profile. 523 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0454 923 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Mal4g0454 923 CDD STKc_IRAK 529 798 - -
Mal4g0454 923 Gene3D Phosphorylase Kinase; domain 1 494 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0454 Mal-Chr4 3971011 3973782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0454 16 923 Receptor kinase-like Gene Family AT3G59420 66.193 0.0 1224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mal4g0454 PK_Tyr_Ser-Thr 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0454 - - gmx:100809215 1447.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal7g2421 7 84724052 84726793 Mal4g0454 4 3971011 3973782 PCT