Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0444 ATGTACCATAAAGAGAATCAAAATATGGAGATAAGTCCTTACAATACTTCAAAGAAAACAACACAATTGAAGAAGTTGAACCATCAAAATATTAGCTATTTTCTTCATGAAGCTACAACCATAGACATGATGCATACATCATCAAGCAATCATCAAACATCTTCAGATAATTCTAGTGAGACATGTCATCGTGATCAAGATGGTAAATGGTCCTCCAAACTTCTCAAAGAGTGTGCAATAGCAATATCTAATAGAGATTCATCAAAAATCCACCATCTTCTTTGGATGTTAAATGAGTTATCTTCACCTTATGGAGATATTGATCAAAAACTAGCTTCATATTTTCTACAAGCTCTATTTTCCAAGGCAACACAATCTGGTCACAAGTGTTACAAAACACTATCCTCAATTGCTTACAAAAACCACTCTTTTGATTCAGCAAGAAAATTAATACTCAAGTTTCAAGAGGTAAGTCCATGGACAACTTTTGGACACGTGGCATCAAATGGTGCTATTTTAGAAGCTTTAGAAGGAGAGAAAAAACTTCACATAATTGATATTAGCAACACACTTTGTACTCAATGGCCTACTCTTCTAGAAGCTTTGGCTACAAGAAATGATGAAACTCCTCACCTTAAGCTCACAATTGTTGTCACAAACAATTGTTCTAGTGTTGTTGTTATGAAGGAAGTTGGTCAAAGAATGGAGAAATTTGCTAGGTTAATGGGAGTACCTTTTGAATTGAATGTTATTAGTGGTTTGAAACATATAAGAGAATTAACAAAAGAGAGGTTAGGAATTCAAGAAGGTGAAGCAATAGCTTTGAATTGTGTTGGAGCATTGAGAAGAGTTGAAGTTGAAGAAAGAGAAAGTGTGATTCAATTTTTCAAATCACTTAGTCCTAGAGTTGTGACATTTGTTGAGGAAGAAGGTGATTTTTGTAGTGATGATTTTGTTAAATGTTTTGAAGAGTGTCTTAAGTTTTATAGAATTTATTTTGAGATGTTAGAGGAGAGTTTTCCACCAACAAGTAATGAGAGGTTAATGTTGGAAAGGGAGTGTTCAAGAAGCATAGTTAGGGTTTTGGCTTGGGATAATGAATTTGATGATGAAGATGATGATGGTGGTGATTATTGTGAGAAAAGGGAGAGAGGAAAACAATGGTTTGAAAGGTTTAGGAATGAATTTTCACCTTGTGGATTTAGTGATGATGTTGTGGATGATGTCAAAGCATTGCTAAAGAGGTATCAAGCTGGTTGGTCACTTGTTGTGCCTCAAGGAGATGATCATATTTCAGGAATTTACCTCACATGGAAGGAGGAGCCAGTTGTTTGGGCATCAACATGGAAACCCTAG 1356 0.3518 MYHKENQNMEISPYNTSKKTTQLKKLNHQNISYFLHEATTIDMMHTSSSNHQTSSDNSSETCHRDQDGKWSSKLLKECAIAISNRDSSKIHHLLWMLNELSSPYGDIDQKLASYFLQALFSKATQSGHKCYKTLSSIAYKNHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGEKKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTIVVTNNCSSVVVMKEVGQRMEKFARLMGVPFELNVISGLKHIRELTKERLGIQEGEAIALNCVGALRRVEVEERESVIQFFKSLSPRVVTFVEEEGDFCSDDFVKCFEECLKFYRIYFEMLEESFPPTSNERLMLERECSRSIVRVLAWDNEFDDEDDDGGDYCEKRERGKQWFERFRNEFSPCGFSDDVVDDVKALLKRYQAGWSLVVPQGDDHISGIYLTWKEEPVVWASTWKP* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0444 451 ProSiteProfiles GRAS family profile. 62 450 IPR005202 -
Mal4g0444 451 PANTHER PROTEIN SHORT-ROOT-LIKE 42 450 - -
Mal4g0444 451 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 450 IPR005202 -
Mal4g0444 451 Pfam GRAS domain family 73 450 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0444 Mal-Chr4 3855862 3857217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0444 67 451 GRAS Transcription Factor Family AT4G37650 51.980 1.07e-141 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal4g0444 GRAS 1e-90 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0444 - - gmx:100818806 632.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0444 4 3855862 3857217 Mal4g0444 4 3855862 3857217 ECH
Mal5g0746 5 12379956 12381632 Mal4g0444 4 3855862 3857217 PCT