Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0435 ATGGAATACCCTTTTTATCCTAACGGAAGAGGAATTGGGTATTGGCAGTCTCCTGGAACTCAGTTGGAAGGATCAACACCATTAGATGGTGGAATCAGCAATTTGATGTCAGAGGATATGCCTAACAGCTTCTCTGAGCTCATGAACTTTGATACTTATGCTGGTTTGTGTTCTGGCCCATCCATGACTGATCAGATTATGGCTAGTGAGCTTCCATCACTTGCCTCGGTACTATATCAATCGCCTGATGGATTCAATCCAGTCGAACAGAACAGTGGACAATTCTATATGACAGGAGGAGTCGGTGGAAATTACAATAATTTGGAAAGCTCCCCTATTTTTGGGGAGAAAATTGTGTGTCAGCAAATGGATACCTTACTTGGTTTCTTAGACAACAGCAATGATGCAAATGACTTAAGTTCTAGGCAAAAATTTGACGACCCTTCGCAACATGTCAATGCCTTTGATATGGGCAATTACGTAATCGCCAGGCCACGAGCTTTAATCTCCAGGCCACCTGCTTTGTCACTTGATGAGAGAATGCTGAAAGCCTTGTCCTTCTTTAAAGAATCAGCTGGTGGGGGAATATTGGCACAAGTTTGGGTTCCCATAAAGCATGATGGTCAAGTGTTCTTAAGCACCAGCGAGCAACCTTATTTACTAGATCAAATGCTTGCAGGGTATCGTGAAGTGTCAAGGACATTTACATTTTCTACAGAAGGAAAACCAGGATGTATACCGGGTCTTCCTGGCCGTGTGTTTATCTCCAAAGTTCCTGAGTGGACTTCCAATGTTGGTTATTACAATCCAACGGAGTACTTGAGGGCTGAGCATGCAAAAAATCACGAGGTTCGTGGTTCAATTGCTTTTCCCATATTTGATCTGCACTCTGGACTGCCATGTTCTGCTGTCTTGGAACTTGTGACTATGAAGGAAAAGCTTGATTTTGACAGAGAGTTGGAAATCATTTGTCGGTCACTTCAGCTTGTAAATTTAAGGACTTCTGTGTCTTTTCGGCTGCTTCCTGAGTGTCTTTCGACCAATAAAAGAGCTGCTTTAACAGAGATAGTTGATGTGTTACGATCTGTGTGTCATGCACATAGGTTGCCATTGGCACTAACATGGATTCCATGTTTTTACAATGACGACACAAGAGATGAAACTGCTAGAATACAAATTAAAGAGGGTAATTCAAGTTCTAGAGAAAAAAACATACTGTGTATTGAAGAATCAGCTTGCTATATAACTGATAGAGTGATGGAAGGATTTGTGCGTGCATGCATTGAACATCCTCTTGAGGAAGGAAAAGGTGTTGCTGGGAAAGCACTTCAATCAAACCATCCTTTCTTCTATTCTGACGTGAAAACATATGATATTAGTGAGTATCCGCTTGTTCATCATGCACGCAAGTTCAATTTGAGTGCTGCAGTTGCAATCAGGCTAAGGAGTATTTATACTAATAATGATGATTACATATTGGAATTCTTTCTTCCTATCAATATGAAAGGGAGTTCAGAACAGCAACTTTTATTAGACAACCTCTCAGGTACCATGCAGAAAATTTGTAAGAGTTTGAGGACAGTTTCAGGTGCTGAACTATCAGGAATGGAAAGCTCTCTGGTGGGGTTTGGAAAGAAAAATGTCCCAAGTTTCCCCCCCGCATCTACAAGAAACTCTCAGATATCACTAATAAGTGAAAACCATGGTTCTGTTCCGAAGCTATCATTGGATGCTTCTAACCTGAGAAACAATGGAAACGAGCCTTCTAATAATCAGGAAAAAAATGGATCGAGCAGGCGAGTTGAGAAAAAAAGAAGCACATCAGAGAAGAATGTTAGCTTGAGTGTTCTCCAACAATACTTTTCTGGTAGTCTGAAGGATGCTGCAAAAAGCATTGGTGTTTGCCCGACAACTCTGAAAAGGATATGTAGGCATCACGGAATTGCAAGATGGCCATCCCGCAAGATTAATAAAGTGAATCGTTCTTTGAAGAAAATTCAGACTGTGCTGGACTCTGTTCAGGGAGTTGAAGGCGGGTTGAAGTTTGATCCTTCCGCGAGGGCATTTGTGGCAGGAGGGACAACCATACATGAAATTGATGAAAATAGAAGTCTCCTTTTCCCCGAGAGAAGTACTACACAAGATTCTGAGCCTATTTCACAAGATGCTGTCTCGGTGCCTAGTGAAGGTGAGGCTTCGGAAAATAAGTTAGAGGGAAAATTGAAGGAAACCAACGCTTGTTCGATCGATTGCAGTGAAGATTCAAAATCACTTGCAACGGATGATTTTCCTGAACAAGCTTGTATTGGTTCCGTTCTTGCAAAAGGTGATGAATGGGTTCTGAACAAGGGCGGTTTGAGAGAAGAAAAATGTAAACATAAAACTATTGGCCAGAGGACAAGTGCCTTTGCTGTTGATGAGATGGACACTGGTGCGGATGGGGATGATGAGGTTGTTGAACACAACCATCCTACTTCTTCAAGTTTGACAGACTCGTCTAATGGCTCTGGTTCAATCATACACGACATCTCATCAGGTTACCAGAGCTTTAAGAACGAGAAGCAGTCCAAAGGCAAATCAACCATTGTTGATTGCGGGTCAAAAATCGTCGTGAAAGCTACCTACGGAGAAGACACCATTCGTTTCAAGTTTGATCCCTCCACAGGTTGTTTCAAGTTATATGAAGAAGTTGCAGCAAGATTCAAACTGCAAAACGGGACATTCCAGCTCAAATATCTAGACGATGAAGAAGAATGGGTGATGCTAGTGAACGACTCGGATTTGCAAGAATGTATGGAAGTATTGAGTGATATGGGGACACATAATGCAAGGTTTCTTGTTCGCGATATGCCTTGCACTTTTGGCAGCTCTGGCAGTAGCAGTTGCTACTTGGGAGGCAGCTCATAG 2907 0.4207 MEYPFYPNGRGIGYWQSPGTQLEGSTPLDGGISNLMSEDMPNSFSELMNFDTYAGLCSGPSMTDQIMASELPSLASVLYQSPDGFNPVEQNSGQFYMTGGVGGNYNNLESSPIFGEKIVCQQMDTLLGFLDNSNDANDLSSRQKFDDPSQHVNAFDMGNYVIARPRALISRPPALSLDERMLKALSFFKESAGGGILAQVWVPIKHDGQVFLSTSEQPYLLDQMLAGYREVSRTFTFSTEGKPGCIPGLPGRVFISKVPEWTSNVGYYNPTEYLRAEHAKNHEVRGSIAFPIFDLHSGLPCSAVLELVTMKEKLDFDRELEIICRSLQLVNLRTSVSFRLLPECLSTNKRAALTEIVDVLRSVCHAHRLPLALTWIPCFYNDDTRDETARIQIKEGNSSSREKNILCIEESACYITDRVMEGFVRACIEHPLEEGKGVAGKALQSNHPFFYSDVKTYDISEYPLVHHARKFNLSAAVAIRLRSIYTNNDDYILEFFLPINMKGSSEQQLLLDNLSGTMQKICKSLRTVSGAELSGMESSLVGFGKKNVPSFPPASTRNSQISLISENHGSVPKLSLDASNLRNNGNEPSNNQEKNGSSRRVEKKRSTSEKNVSLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRHHGIARWPSRKINKVNRSLKKIQTVLDSVQGVEGGLKFDPSARAFVAGGTTIHEIDENRSLLFPERSTTQDSEPISQDAVSVPSEGEASENKLEGKLKETNACSIDCSEDSKSLATDDFPEQACIGSVLAKGDEWVLNKGGLREEKCKHKTIGQRTSAFAVDEMDTGADGDDEVVEHNHPTSSSLTDSSNGSGSIIHDISSGYQSFKNEKQSKGKSTIVDCGSKIVVKATYGEDTIRFKFDPSTGCFKLYEEVAARFKLQNGTFQLKYLDDEEEWVMLVNDSDLQECMEVLSDMGTHNARFLVRDMPCTFGSSGSSSCYLGGSS* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0435 968 Gene3D - 864 949 - -
Mal4g0435 968 Pfam PB1 domain 870 948 IPR000270 GO:0005515
Mal4g0435 968 CDD PB1_NLP 871 949 IPR034891 -
Mal4g0435 968 MobiDBLite consensus disorder prediction 709 728 - -
Mal4g0435 968 MobiDBLite consensus disorder prediction 709 737 - -
Mal4g0435 968 Pfam RWP-RK domain 611 659 IPR003035 -
Mal4g0435 968 PANTHER PROTEIN NLP8 5 965 IPR045012 GO:0003700
Mal4g0435 968 ProSiteProfiles PB1 domain profile. 868 940 IPR000270 GO:0005515
Mal4g0435 968 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 965 - -
Mal4g0435 968 MobiDBLite consensus disorder prediction 574 610 - -
Mal4g0435 968 ProSiteProfiles RWP-RK domain profile. 593 679 IPR003035 -
Mal4g0435 968 SUPERFAMILY CAD & PB1 domains 860 952 - -
Mal4g0435 968 MobiDBLite consensus disorder prediction 806 835 - -
Mal4g0435 968 SMART PB1_new 868 950 IPR000270 GO:0005515
Mal4g0435 968 MobiDBLite consensus disorder prediction 574 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0435 Mal-Chr4 3759858 3765969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0435 1 965 NLP Transcription Factor Family AT2G43500 49.032 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mal4g0435 PB1 1.1e-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0435 - - gmx:100804426 1353.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0435 4 3759858 3765969 Mal4g0435 4 3759858 3765969 ECH
Mal4g0435 4 3759858 3765969 Mal7g2444 7 84981646 84985497 PCT