Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0417 ATGTTGCCAAAACCTCATCAACATATGTCACACATTGAAGATGAAGAATCCTCCATCGTGATCGCCATCGATACAGCCAAGAACAGCAAACATGCTGTAAAGTGGGCTGTTGATCACCTTTTGAACAAGAAATCATCATGCACCCTCATTCACGTTAGAACCAAGGCCTTCAATCCCAATGAATTTGATGCTGTCCCTAAACAAGGTCGTGCACCAACGCAAGAAGAATTGCATCAGCTTTTTCTTCCCTTCCGAGGATTTTGTGCTCGAAAAGGGGTCATAGCAGAGGAGTTGATCCTGCATGACATTGATGTTCCAAGTGCACTAACTGATTACATTATTGACAACTCTATCACCGACGTTGTTCTTGGTGCTCCTCGCTGGAATAATGCTTTTATAAGGAAATTTAAAGATGTAGATCTGCCAACAAGTTTGATCAAGTCTCTGCCAGAGTCTTGTATGGTGCATATTATATCAAAAGGAAAAGTCCAGAGTATTCAAGCAACAGCTCCTTCCCAAAACATTACTATTTCTAGTCCCAAGCCAGATTATTTGTCCAAAGATTTAAACAGAAAATCAATCAATAGAATACGGCGGCGCTTAAGCAGCGATGGTGGATCCTTTGTTCAAAACAAGGATGCAAGACTAGTATCAAGATGCATGTCCCATAGAGAGACTTATGCATCAAGGATATCCCTATCAGATGAAAACCAAGATGCAGTAGACAAGTCACATAATAGCATGGAGATAGAAATAAATAGATTAAAACAAGAGCAGAACAGAACTAAAAAGAAGGGTGGGTCTGCGTCGGTTGGTAGAGAAGCCAGTTCCACGAAACAGAAGGAAATGGAAGTTGAAAAGTGTAAGCAAGAAATATGGATCAGAGAAAAGGCTAGGTTTGTTGAAGAGGAGGCTGCATTGGATTTGGCAGAGGCAGAATTGAAGACTCAGAAGAGAAAACAGAAAGAAGTAAGTTCTGTGCATGAAGAAGAGGAAGAAGAAGAGACAATGAGAACATCAAATGCAATTGAACATAACCAAATTATATTTAAAAGATACAATATTGAAGAAATTGAAGTTGCAACAAATTACTTTGATACTGATGGCATAATTGGTGAAGGTGGATATGGACCTGTTTTCAAAGGAGTACTTGACAACACTGCTGTAGCAGTTAAAGCCTTAAGACCGGACATGACTCAAGGGGAGAAACAATTTAATCAAGAGGTCCTTGTTTTAAGCTCCATAAGACATCCCAACATTGTAATACTTTTAGGCGCCTGTCCGGAGTACGGATGCCTCGTGTACGAGTACCTAGACAACGGAAGCTTAGAAGATCGTCTTTTTCAAAAAGACAATACGCCGCCAATTCCATGGAAGACTCGGTTCAAAATAGCATCAGAGATTGCGACAGGCCTTCTTTTCCTTCACCAAACCAAACCAGAACCGGTTGTGCATCGTGATCTCAAGCCCGCAAACATTCTCTTAGACAGAAACTATGTTAGCAAGATCTCCGATGTTGGTTTGGCAAGGCTAGTTCCTCCTTCTATCGCCAACAAAACCACTCAATACCATAAGACAGCTGCAGCCGGCACATTTTGTTATATCGATCCGGAGTATCAACAAACGGGACTATTGGGCGTAAAATCAGACATATATTCATTAGGTGTTATGCTGCTACAAATCATTACTGGAAAGCCTCCTATTGGTATTGCTCATATGGTTGAGGAGGCCATTCAGAATGATAATCTTGCAGAGGTTTTAGATCCGAATGTGACCGATTGGCCGGTTGAAGAGGCTCTATCATTTGCTAAATTAGCTTTGAAGTGTTGTGAGATGAGAAGAAGGGATAGACCAAATCTTGCTTCTGTCATTTTGCCAGAACTGAATAGACTCAGAGATCTAGAACTACAGGACAGCACAGGAGGGAAATGA 1932 0.411 MLPKPHQHMSHIEDEESSIVIAIDTAKNSKHAVKWAVDHLLNKKSSCTLIHVRTKAFNPNEFDAVPKQGRAPTQEELHQLFLPFRGFCARKGVIAEELILHDIDVPSALTDYIIDNSITDVVLGAPRWNNAFIRKFKDVDLPTSLIKSLPESCMVHIISKGKVQSIQATAPSQNITISSPKPDYLSKDLNRKSINRIRRRLSSDGGSFVQNKDARLVSRCMSHRETYASRISLSDENQDAVDKSHNSMEIEINRLKQEQNRTKKKGGSASVGREASSTKQKEMEVEKCKQEIWIREKARFVEEEAALDLAEAELKTQKRKQKEVSSVHEEEEEEETMRTSNAIEHNQIIFKRYNIEEIEVATNYFDTDGIIGEGGYGPVFKGVLDNTAVAVKALRPDMTQGEKQFNQEVLVLSSIRHPNIVILLGACPEYGCLVYEYLDNGSLEDRLFQKDNTPPIPWKTRFKIASEIATGLLFLHQTKPEPVVHRDLKPANILLDRNYVSKISDVGLARLVPPSIANKTTQYHKTAAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMLLQIITGKPPIGIAHMVEEAIQNDNLAEVLDPNVTDWPVEEALSFAKLALKCCEMRRRDRPNLASVILPELNRLRDLELQDSTGGK* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0417 643 PANTHER OS02G0152300 PROTEIN 18 639 - -
Mal4g0417 643 MobiDBLite consensus disorder prediction 318 339 - -
Mal4g0417 643 Pfam Protein kinase domain 367 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0417 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Mal4g0417 643 Coils Coil 300 320 - -
Mal4g0417 643 Gene3D Phosphorylase Kinase; domain 1 318 437 - -
Mal4g0417 643 SMART serkin_6 365 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0417 643 MobiDBLite consensus disorder prediction 253 278 - -
Mal4g0417 643 SUPERFAMILY Protein kinase-like (PK-like) 346 624 IPR011009 -
Mal4g0417 643 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 18 639 - -
Mal4g0417 643 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 127 - -
Mal4g0417 643 CDD STKc_IRAK 371 631 - -
Mal4g0417 643 Gene3D HUPs 17 136 IPR014729 -
Mal4g0417 643 Pfam Universal stress protein family 19 130 IPR006016 -
Mal4g0417 643 Gene3D Transferase(Phosphotransferase) domain 1 438 640 - -
Mal4g0417 643 ProSiteProfiles Protein kinase domain profile. 365 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0417 643 Coils Coil 245 265 - -
Mal4g0417 643 CDD STK_N 18 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0417 Mal-Chr4 3614962 3618732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0417 13 638 Receptor kinase-like Gene Family AT1G17540 44.828 0.0 599
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Mal4g0417 Pkinase 3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0417 - - gmx:100814365 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0652 5 10562374 10569648 Mal4g0417 4 3614962 3618732 PCT