Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0410 ATGGAACCTCGTATTGGTAACAAGTTTCGTCTTGGCCGCAAAATCGGTAGCGGATCCTTCGGCGAGATCTATCTCGGTACAAATATTCAGACAAATGAAGAGGTTGCAATTAAGCTTGAAAATATTAAAACCAAGCATCCTCAGTTGTTGTATGAATCGAAGTTGTATAAAGTACTTCAAGGAGGAACTGGTATCCCAAATGTGAGATGGTTTGGCGTAGAAGGAGAGTACAATGTTCTCGTGATGGATTTACTGGGACCTAGTCTCGAGGATTTATTCAGTTTTTGTAGTCGGAAATTGTCCCTTAAAACTGTACTCATGCTCGCTGATCAGATGATAAATCGAGTTGAATATGTTCATTCCAAATCATTTTTACATAGGGACATCAAGCCAGACAACTTCCTCATGGGTTTGGGGAGGCGAGCTAATCAAGTTTATGCCATTGACTTTGGTCTTGCTAAAAAATACAGAGACACCTCTACCCATCAGCACATACCTTACAGAGAGAATAAGAATTTGACAGGAACTGCTAGATATGCTAGTATGAATACACATCTTGGAATTGAGCAAAGCCGTAGGGACGACTTGGAATCACTTGGATATGTGCTTATGTACTTTTTGAGAGGAAGCCTTCCATGGCAGGGATTGAAAGCAGGTACTAAAAAGCAGAAGTACGAGAAAATCAGCGAGAAGAAAGTTTCTACCTCTATTGAGTCCTTGTGTCGTGGCTACCCCTCAGAATTCGCTTCGTACTTCCACTATTGTCGGTCATTGCGGTTTGATGATAAACCAGATTATGCATATTTGAAAAGGCTTTTTCGCGACCTTTTCATTCGTGAAGGATTCCAGTTTGATTATGTCTTTGATTGGACCATTTTGAAATATCAGCAATCTCAAATTGCCACTCCTTCTGCACGTGCCATTGGTTCTGGTGCTGGGCCAAGTTCTGGCATACCACCAGCTGTTGTGAGTGCTGATAGACCAATAGGTGGGGAAGAGGGTAGACATGCTGGTTGGTCTTCATCAGATCCTTCTCGTAGAAGAAACTCTGGACCTATTGCAAATGATGGAAACTTGTCTAGACAAAAAGCCCCGGTTCCAAGTGACTCAAATGGATCTAAAGAAGTTATGTTGTCCAGTTCTAATTTCTTCCGGCCAAGTGGATCTACAAGACGAGTAGGTGCTGTTTCCAACAGTCGTGATGCAGTTGCTGGCAGCGAGATTGAACCCTCTCTTCCTCTTGCCAGGGATGGTAGTCCTGGAACACTCCTTAAAACCTCTGGTGCTCAAAGAAATTCACCTATCACATCATCGGAGCACAAAGCAACAACATCTTCTGGCAGAAACGCATCGAACATGAAGAATTTTGAGTCAACTATCCGAGGTATTGAGAGCCTGAATTTCAATGATGAGAAGGTACAGTATTAG 1428 0.4258 MEPRIGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENIKTKHPQLLYESKLYKVLQGGTGIPNVRWFGVEGEYNVLVMDLLGPSLEDLFSFCSRKLSLKTVLMLADQMINRVEYVHSKSFLHRDIKPDNFLMGLGRRANQVYAIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIATPSARAIGSGAGPSSGIPPAVVSADRPIGGEEGRHAGWSSSDPSRRRNSGPIANDGNLSRQKAPVPSDSNGSKEVMLSSSNFFRPSGSTRRVGAVSNSRDAVAGSEIEPSLPLARDGSPGTLLKTSGAQRNSPITSSEHKATTSSGRNASNMKNFESTIRGIESLNFNDEKVQY* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0410 475 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0410 475 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0410 475 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mal4g0410 475 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mal4g0410 475 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 460 IPR030509 GO:0004672|GO:0005524
Mal4g0410 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mal4g0410 475 MobiDBLite consensus disorder prediction 343 396 - -
Mal4g0410 475 PANTHER CASEIN KINASE-RELATED 1 460 - -
Mal4g0410 475 MobiDBLite consensus disorder prediction 306 456 - -
Mal4g0410 475 MobiDBLite consensus disorder prediction 423 456 - -
Mal4g0410 475 CDD STKc_CK1_delta_epsilon 8 282 - -
Mal4g0410 475 Gene3D Transferase(Phosphotransferase) domain 1 1 309 - -
Mal4g0410 475 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0410 Mal-Chr4 3503364 3509023 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0410 7 223 EF-hand Containing Proteins AT2G17890 26.667 8.47e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mal4g0410 Pkinase 1.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0410 K02218 - gmx:100778165 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0410 4 3503364 3509023 Mal5g0622 5 9921856 9926485 PCT