Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0409 ATGCCACGGGGGAGGAGGATTAGGGCAAAGCTCCGGCGGAGCAATCTTTATACGTTTAGTTGCCTTCGGCCGAATACTGATGAGGAGGTGCCTCATCCACTTCAAGGTCCTGGTTACTCAAGAACCGTGTATTGCAACCAGCCTCAAGTTCATGAAAAGAAAAATTTATTTTACTGCAAGAATAATATATCAACGACCAAATACAATGCTATCATGTTTTTTCCTAAGGCGCTGTTTGAACAGTTTCGAAGGGTTGCTAATATATACTTCCTTTTGGCCGCTTGTCTCTCGTTATCTCCAATTACACCTTTCAGTCCACTGAGCATGATTGCTCCTTTGGCCTTTGTTGTGGGGCTTAGTATGGCAAAGGAAGCATTGGAGGATTCACGTAGGTTCCTTCAAGATGTTAAGGTTAATCGACGGAAAGCTAGTCTCCATAAAGGCAATGGCGTTTTTGGTTTCAGGTCATGGCAGAAAATTATGGTTGGGGATATAGTGAAAGTAGAAAAGGACCAATTTTTTCCAGCTGACTTGCTTCTCTTGTCTTCAAGTTATGAGGATGGGATATGCTATGTGGAGACCATGAATTTAGATGGAGAGACCAACTTGAAGGTCAAAAGATCTTTGGAGGCTACCTTTTCCCTTGATAATGATGGAGCTTTTAAGGATTTCTCTGGAACAATACGCTGTGAAGACCCAAATCCCAATCTTTACACTTTTGTTGGGAATTTTGAGTATGAACGTCAGGTTTATCCTCTTGATCCTGGTCATATACTCCTTCGAGATTCAAAGCTCAGGAACACAGAGTATGTCTATGGGGTGGTCATTTTCACTGGCCACGACAGCAAAGTCATGCAAAATTCTACAAAATCCCCTTCAAAAAGAAGCACAATAGAGAAAAAGATGGATTATATCATATACACTCTTTTCACTGTCCTTATAGTGATATCCTTTATTAGTTCAATAGGATTTGTTGCTAAGACTAAGTACGAGACCACAAAGTGGTGGTATTTACGGCCCGACGAGATTGAATATCAGTTTGATCCTCAGAAAATTGGATTTGCTGGGATGAGCCATCTGATCACTGCACTTATTCTTTATGGATATTTGATACCCATCTCTCTTTACGTTTCAATTGAGGTTGTGAAGGTATTACAGGCCACCTTCATTAACCAAGACCTTCAAATGTATGATGAAGAAACCGGGACTCCTGCTGAAGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACCATCCTCTCTGATAAAACTGGAACTTTAACCTGCAACCAGATGGACTTTTTGAAGTGCTCCATTGCTGGTACTTCCTATGGTGTACGTTCCAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCTACTGATCTTGAGGAGGAAGATTTGGATCTCTCTAATTTTCCTATGCAAAAGAAGGGTAAAGCGCCGTGGGAAAATGTCAGTAGAGCTGAAGAAATTGAACTTGAGACAGTTGTTACTTCTAAGGGTGGTGAGGATCAAAAGCCTGCCATAAAGGGATTTGGTTTTGATGATAGCCGCCTCATGAATGGTAATTGGTCGAAAGATCCCAATGCTGATGTCATTTTGTTGTTTTTCCGTATACTAGCAGTTTGCCATACTGCCATTCCTGAGCTTAATGAGGAGAGCAACAATTGTACTTATGAAGCTGAATCACCAGATGAAGGGGCTTTTCTTGTAGCTGCTAGAGAATTTGGTTTTGAATTTTATAGAAGAACTCAATCTAGTGTTGTCGTACGCGAAAGAATTTCTGCTTCAGGACAAGTGGTTGAGAGAGAGTATAAAATTTTGAATCTGCTGGATTTTACTAGCAAAAGAAAGCGTATGTCAGTGATTGTACGTGATGAGGAGGGAAGCATTATTCTTTTTTGCAAAGGAGCTGACAGTATCATATTTGATCGATTATCTAAGAATGGAAAGAAGTATTTGGAGACTACTTCTAGGCATTTGAATGAATATGGAGAAGTGGGTTTGAGAACATTAGCCCTGGCTTACAGAAAGCTTGATGAACAAGAGTACTCTGATTGGAACAACGAGTTTCAGAAAGCCAAGACAACTGTTGGGTCTGATAGAGAGGCAATGCTTGAGAAGGTATCAGATAGTATGGAAAGAGAGTTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAGCTGCAGAAAGGGGTGCCTCAATGCATTGATAAACTTGCTCAAGCTGGTCTCAAGATCTGGGTCTTGACAGGGGATAAGATGGAAACTGCAATCAACATTGGATTTGCATGTAGTTTGCTTCGACAGGGCATGAAGCAAATCTGTATCTCTACTACAAATTCAGATTCAGTAATCAATGATGGAAAAGAGGCAATCAAAGGCAATATCTTGACTCAAATCACCAATGCCGCACAATTGATGAATCTGGAGAAGGACCCACACGCCGCGTTTGCATTAATTATTGACGGAAAAACTCTAACATATGCTTTAGAAGATGATATCAAACACCAATTTTTGGGATTAGCTGTTAATTGTGCATCTGTCATTTGCTGCCGTGTATCTCCCAAGCAAAAGGCCCTGGTAACAAGGTTAGTGAAAGAAGGAACCGGAAAGACCACTTTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCTGACATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTTTCCATTGCTCAATTTCGATTTTTGGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGATATGTTATTTCTTCTACAAAAATATAGCATTTGGCCTCACAATATTCTATTTTGAGGCCTTTGCGGGCTTCTCTGGTCAATCGGTTTATAATGATTGGTACATGATACTGTTCAATGTTATTCTTACATCATTGCCTGTCATTTCACTTGGAGTTTTTGAACAAGATGTGCCGTCTGAAGTTTGCTTACAGTTTCCTGCACTTTATCAGCAAGGACCCAAAAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGGAATGGTCTGTACTCCTCCCTCGTCATCTTCTTCCTTGTCATCATCATCTTCCATGACCAAGCATTCCGTCTGAATGGCCAGACTGCAGACATGGCTGCTGTTGGTACCACGATGTTCACCTGCATCATCTGGGCTGTCAACTGCCAGATTGCCTTGACAATGAGCCATTTTACGTGGATACAACACCTCTTTGTGTGGGGCAGCATAGCCAGTTGGTACCTGTTTCTCTTATTATATGGCATGCTTTCTCCACAATATTCCATGACTGCGTACCAAATATTGGTTGAAGTGCTTGCTCCTGCTCCTATTTATTGGACAGCAACCATTTTAGTAACTGTTACGTGCAATCTTCCTTATCTTGCCCACATATCGTACCAAAGGTGTTTTAATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAGGAAGGACGTTGAAGATCAACACATGTGGACGAGGGAGCGGTCTAAAGCAAGACAGGAAACAAAGATTGGATTCACAGCAAGAGTGGAAGCATCGATCAGGCAGCTGAAAGGGAAGCTGCAGAAGAAGCAATTTTCGGGGGCGGTTTTGTCCCCATCATGA 3675 0.4171 MPRGRRIRAKLRRSNLYTFSCLRPNTDEEVPHPLQGPGYSRTVYCNQPQVHEKKNLFYCKNNISTTKYNAIMFFPKALFEQFRRVANIYFLLAACLSLSPITPFSPLSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNRRKASLHKGNGVFGFRSWQKIMVGDIVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEATFSLDNDGAFKDFSGTIRCEDPNPNLYTFVGNFEYERQVYPLDPGHILLRDSKLRNTEYVYGVVIFTGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLIVISFISSIGFVAKTKYETTKWWYLRPDEIEYQFDPQKIGFAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDLQMYDEETGTPAEARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTSYGVRSSEVELAAAKQMATDLEEEDLDLSNFPMQKKGKAPWENVSRAEEIELETVVTSKGGEDQKPAIKGFGFDDSRLMNGNWSKDPNADVILLFFRILAVCHTAIPELNEESNNCTYEAESPDEGAFLVAAREFGFEFYRRTQSSVVVRERISASGQVVEREYKILNLLDFTSKRKRMSVIVRDEEGSIILFCKGADSIIFDRLSKNGKKYLETTSRHLNEYGEVGLRTLALAYRKLDEQEYSDWNNEFQKAKTTVGSDREAMLEKVSDSMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICISTTNSDSVINDGKEAIKGNILTQITNAAQLMNLEKDPHAAFALIIDGKTLTYALEDDIKHQFLGLAVNCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFAGFSGQSVYNDWYMILFNVILTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLVIFFLVIIIFHDQAFRLNGQTADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSIASWYLFLLLYGMLSPQYSMTAYQILVEVLAPAPIYWTATILVTVTCNLPYLAHISYQRCFNPMDHHIIQEIKYYRKDVEDQHMWTRERSKARQETKIGFTARVEASIRQLKGKLQKKQFSGAVLSPS* 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0409 1224 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1148 IPR023298 -
Mal4g0409 1224 Gene3D - 420 432 IPR023214 -
Mal4g0409 1224 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 3 1220 - -
Mal4g0409 1224 Gene3D - 433 457 IPR023299 GO:0000166
Mal4g0409 1224 SUPERFAMILY Calcium ATPase, transduction domain A 149 287 IPR008250 -
Mal4g0409 1224 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 852 962 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal4g0409 1224 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Mal4g0409 1224 Gene3D - 720 921 IPR023214 -
Mal4g0409 1224 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Mal4g0409 1224 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 687 IPR023299 GO:0000166
Mal4g0409 1224 SUPERFAMILY HAD-like 411 925 IPR036412 -
Mal4g0409 1224 SFLD p-type atpase 405 932 IPR044492 -
Mal4g0409 1224 Coils Coil 449 469 - -
Mal4g0409 1224 Pfam Cation transport ATPase (P-type) 547 651 - -
Mal4g0409 1224 CDD P-type_ATPase_APLT_Dnf-like 61 1041 - -
Mal4g0409 1224 Gene3D - 592 703 IPR023299 GO:0000166
Mal4g0409 1224 Gene3D - 114 289 - -
Mal4g0409 1224 SFLD C1.7: P-type atpase like 405 932 - -
Mal4g0409 1224 Pfam Phospholipid-translocating P-type ATPase C-terminal 909 1159 IPR032630 -
Mal4g0409 1224 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Mal4g0409 1224 PRINTS P-type cation-transporting ATPase superfamily signature 881 900 - -
Mal4g0409 1224 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 58 1167 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Mal4g0409 1224 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 3 1220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0409 Mal-Chr4 3494479 3500547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0409 1 1215 Primary Pumps ATPases AT1G17500 75.493 0.0 1922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0409 K01530 - gmx:100778710 2199.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0409 4 3494479 3500547 Mal5g0621 5 9912598 9918168 PCT