Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0405 ATGGGTACTTCTGGAAAATGGTTCAAATCACTTCTTTCGAATAAAAAAACCTCAACCGATCAAGAGAAGAAGATTAGTACGAAGAAGAAATGGAAACTATGGAAAAGTTCTTCAGAAGGGTCTTCTTCAACCATGAAGAAGAGTGGTGCTGCTGCTGTGTCTGATTCTTCGATCACCGATACTGCTGCTGCGGTTGCTGTCGTTGTTCGAGCTGCACCTAAAGATTTCATCCTTATCAAGCAGGAATGGGCTGCTATTCGAATTCAATCTCTGTTTCGAGCTTTCTTGGCTAGAAGAGCTTTGAGGGCATTGAGAGCAGTGGTGAGGCTGCAAGCAATATTTCGAGGCAGGCAAGTGAGAAAACAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTTAGAGTTCAGGCACGTGTAAGGGCTAGGAATGTGAGGAAATCTCCAGAAGGCAAAGCAGTGCAGCAGTTATTGGATGACCATCGCAACCAAGCTGATTCTGCTAAGCTTGTAGAGCAAGGATGGTGTGAAATTCCTGGAACTGCAGATGAAGTTAAAGCAAAGCTAAGAATGAGGCAAGAAGGTGCCATCAAGAGGGATAGAGCAATGGCATACTCTCTGTCCACACAGTCAAGAATAAGTGCTAGTCCAAACTCAAAATCCACAAAATCAGTGTCTCTTTTCAAGCATCACAACAACCTTGACAACAAGAGCTTAGGAAATAGCTTGTTAGAACGCTGGATGGCAAACAAACCATGTCCATGGGAGAGTCCAATCTCAAGCAGGAAGAGTGAAGATCTTGTTCCTACTTTTCAATCAAGAAGGAATGGTGTGACAACTAGGATTTCCGCTCTTAAAGCCTGTCAACAAACTCCATCATCTTCGACAATAAGCTCCGAATACATAAATGATGATAGCATTTTGTCAACTTCAAGTACATCTGGATCTCCATCTATGCCAGAAGCAACAGACGAAAAAGATGCTCACCTACCTAGCTACATGAATTTGACAGAATCAACTAAGGCTAAGCTCAAAGCTTACAGGTCGTCTTCGCAGAATTCGAAGAGACTCGTAATGGATGATTGTATGTCTCATAACACAAGTACAACTTTTCGGAATGGAGATAACAGTATAAGCAGTTCTGGTTCTGACCCTTCAGTTAATTTATGGAAGGATCGCTGTGCAACACCTCTAAGGGCAAGTTATTATCAAAAACGATATGGCAGGAGATAG 1233 0.4274 MGTSGKWFKSLLSNKKTSTDQEKKISTKKKWKLWKSSSEGSSSTMKKSGAAAVSDSSITDTAAAVAVVVRAAPKDFILIKQEWAAIRIQSLFRAFLARRALRALRAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQARVRARNVRKSPEGKAVQQLLDDHRNQADSAKLVEQGWCEIPGTADEVKAKLRMRQEGAIKRDRAMAYSLSTQSRISASPNSKSTKSVSLFKHHNNLDNKSLGNSLLERWMANKPCPWESPISSRKSEDLVPTFQSRRNGVTTRISALKACQQTPSSSTISSEYINDDSILSTSSTSGSPSMPEATDEKDAHLPSYMNLTESTKAKLKAYRSSSQNSKRLVMDDCMSHNTSTTFRNGDNSISSSGSDPSVNLWKDRCATPLRASYYQKRYGRR* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0405 410 ProSiteProfiles IQ motif profile. 105 132 IPR000048 GO:0005515
Mal4g0405 410 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 408 - -
Mal4g0405 410 Gene3D - 79 129 - -
Mal4g0405 410 SMART iq_5 103 124 IPR000048 GO:0005515
Mal4g0405 410 SMART iq_5 80 102 IPR000048 GO:0005515
Mal4g0405 410 MobiDBLite consensus disorder prediction 291 325 - -
Mal4g0405 410 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 123 IPR027417 -
Mal4g0405 410 MobiDBLite consensus disorder prediction 291 320 - -
Mal4g0405 410 PANTHER IQ-DOMAIN 5-RELATED 1 408 - -
Mal4g0405 410 Pfam IQ calmodulin-binding motif 105 122 IPR000048 GO:0005515
Mal4g0405 410 Pfam IQ calmodulin-binding motif 83 102 IPR000048 GO:0005515
Mal4g0405 410 ProSiteProfiles IQ motif profile. 81 109 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0405 Mal-Chr4 3395537 3398252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0405 1 392 IQD Protein Family AT1G72670 47.143 5.98e-93 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0405 - - mtr:MTR_2g099780 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0405 4 3395537 3398252 Mal5g0602 5 9582203 9585162 PCT