Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0398 ATGGCATCTTCATCATCATCTTCTTCTCATGTTCCTCCAATAAAATATGATGTATTCATTAGCTTTAGAGGCACAGACATACGTCATGGTTTTCTAAGCCATTTGAGAAAGGAACTGAGGCAGAAGCAAGTTGATGCCTATGTGGATGATAGACTTGAAGGAGGAGATAACATAACACAAGCACTTGTCAAAGCCATTGAAGGATCACTTATGTCTTTGATCATATTTTCCAAAGACTATGCTTCATCAAAGTGGTGCTTGGAAGAGCTTGTCAAAATAATTGAATGTATGGCAAGAAATAAACAAGTTGTTATCCCTGTTTTCTACAATGTAAATCCAACGGATGTGAGGCACCAAAAAGGAAGTTATGGAGATTCATTAGCTAAACATGAAAAAAATAAAGGAAGCTTAGCCAAGGTGCATAATTGGAGATCTGCTTTGACTATAGCTGCTAATCTTTCTGGATTTCATTCATCACAATTTGGCGATGAAGTTGAGCTTATAGAGGAAATTGTCAAATGTTTGTCATCCAAGTTGAATCTGATGTACCAAAGTGAGTTAACAGATCTTGTTGGAATTGAAGAAAGGATTGCAGATTTGGAGTCACTGTTGTGCCTAGGTTCAAGTGTAGATGTTCTTGTCATTGGCATTTGGGGTATGGGGGGTATTGGCAAGACAACTCTTGCAGCTACAGTGTATAACCGTCTTTGTTTTGAATATGAAGGATGCTGCTTTATGGCAAACATAACAGAAGAATCAGAGAAGCATGGAATGATTTATCTGAAGAATAAAATTCTCTCTATATTGCTAAAGGAAAATGATCTACATATTGGTACACCTAACGGAGTTCCCCCTTATGTTAAGAGAAGGTTGGCTCGTAAAAAGGTTCTTCTTGTTCTTGATGATATCAATGATTTAGAGCACTTAGAGAATTTAGTTGGAGGACTTGATTGGTTTGGATCTGGCAGTAGAATCATTGTAACAACCAGAGATAAGCAAGTGCTTGGTAAAAGAGTCAATTGTATATATGAGGCCAAGGCATTGGAGTCTGATGAGGCTATTAAACTTTTCATCATGAATGCTTTCAATCATGGTTGTCTTGACATGGAGTGGATTGAGCTATCAAAAAGGGTGATTCATTATGCTGATGGAAATCCATTAGCTTTGAAAGTTTTGGGTTCTTTTCTTTATGGTAAAAGCAAAATAGAATGGGAAAGTCAATTACAGAAACTTAAGAAAATGCCTCATGCAAAAATTCAAAATGTATTGAGATTGAGTTATGATAGACTCGATCAAGAAGAAAAGAGCATATTTTTATACCTCGCTTGTCTTTTGAAAGGATATGAAGTACAGCAGATAATAGCTCTGCTTGATGCTTGTGGTTTCTCAACAATTATTGGATTAAAAGTCCTTAAAGACAAAGCCCTTATAATTGAAGCCAAGGGCTCTGGAAGATCAATTGTATCGATGCATGATTTGATACAAGAAATGGGTTGGGAGATTGTTCGAGAAGAATGCGTTGAAGACCCTGGGAAACGCAGTAGGTTATGGGATCCTAATGATGTTCATCAAGTATTGACAAATAACACGGGAACTAAAGCCATTAAAAGCATAACTCTGAACGTCTCAAAATTTGATGAGTTGCAGTTAAGTCCTCAAGTCTTTGGTAGGATGCAGCAGTTAAAATTTCTTAAATTTACCCAACATTATGGCGATGAGAAAATCCTGTATCTTCCTCAGGGTCTTGAATCTTTGCCAAATGACCTACTGCTTTTTCAATGGGTTAGTTATCCTTTGAAATCCTTGCCTCAGTCTTTTTGTGCAGAAAATCTTGTTGAGCTAAAATTGACTTGGAGCCGAGTGGAAAAGCTTTGGGATGGAATTCAGGGGGTGAGAATAGGTAGGCTGACCGACCGATAG 1920 0.3745 MASSSSSSSHVPPIKYDVFISFRGTDIRHGFLSHLRKELRQKQVDAYVDDRLEGGDNITQALVKAIEGSLMSLIIFSKDYASSKWCLEELVKIIECMARNKQVVIPVFYNVNPTDVRHQKGSYGDSLAKHEKNKGSLAKVHNWRSALTIAANLSGFHSSQFGDEVELIEEIVKCLSSKLNLMYQSELTDLVGIEERIADLESLLCLGSSVDVLVIGIWGMGGIGKTTLAATVYNRLCFEYEGCCFMANITEESEKHGMIYLKNKILSILLKENDLHIGTPNGVPPYVKRRLARKKVLLVLDDINDLEHLENLVGGLDWFGSGSRIIVTTRDKQVLGKRVNCIYEAKALESDEAIKLFIMNAFNHGCLDMEWIELSKRVIHYADGNPLALKVLGSFLYGKSKIEWESQLQKLKKMPHAKIQNVLRLSYDRLDQEEKSIFLYLACLLKGYEVQQIIALLDACGFSTIIGLKVLKDKALIIEAKGSGRSIVSMHDLIQEMGWEIVREECVEDPGKRSRLWDPNDVHQVLTNNTGTKAIKSITLNVSKFDELQLSPQVFGRMQQLKFLKFTQHYGDEKILYLPQGLESLPNDLLLFQWVSYPLKSLPQSFCAENLVELKLTWSRVEKLWDGIQGVRIGRLTDR* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0398 639 Pfam TIR domain 15 192 IPR000157 GO:0007165
Mal4g0398 639 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 630 IPR044974 GO:0006952
Mal4g0398 639 Gene3D - 14 180 IPR035897 -
Mal4g0398 639 SMART till_3 15 153 IPR000157 GO:0007165
Mal4g0398 639 Gene3D - 181 341 IPR027417 -
Mal4g0398 639 PRINTS Disease resistance protein signature 214 229 - -
Mal4g0398 639 PRINTS Disease resistance protein signature 290 304 - -
Mal4g0398 639 PRINTS Disease resistance protein signature 382 396 - -
Mal4g0398 639 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
Mal4g0398 639 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 630 - -
Mal4g0398 639 Gene3D - 347 431 IPR042197 -
Mal4g0398 639 ProSiteProfiles TIR domain profile. 14 179 IPR000157 GO:0007165
Mal4g0398 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Mal4g0398 639 Pfam NB-ARC domain 202 428 IPR002182 GO:0043531
Mal4g0398 639 SUPERFAMILY "Winged helix" DNA-binding domain 418 526 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0398 Mal-Chr4 3334152 3365146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0398 16 627 WRKY Transcription Factor Family AT4G12020 32.739 2.54e-90 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0398 - - ccaj:109805840 1077.39