Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0391 ATGAACAACAACATCTCAATCTCAAGAAACAGCAACGGAACAACACAAGCTTGTGCTGCATGTAAATACCAACGTCGTAAGTGTGGTACATCTTGCATTCTTGCACCTTATTTTCCTCACGATCGTCAAAAACAATTCTTAAACGCTCATAAATTGTTTGGTGTTGGTAAAATCACCAACATGATTAAGAATGTTCCACCTCATCTTAGAGATCATACTATGAGTTCTATTATTTTTCAATCTGATATGCGTGCTATGGATCCTGTTGGTGGTTGTTATAGATTCATTCAACAGCTTCAATCTCAATATGAATTTTATCAAGCTGAGCTTCATCTTGCACGTCAACAACTTGCTATTTGTCGAGCTTCACAAACGGCGCCGCCTAATCATCATTATAATGACATGCCCATTAATCATAATCATAATCATAATGATGCTGCTATGAATATTATTAATCATTTTAATCAGCAGCATTTTGTTGATGAACAAATGAATATGAATATGAATATGCTTCCTCAACCGCAACCGCAACTGCAGCCGCAATATGTTGTTGATGATGCCGGTCTTAACCCTAATTATGTTCCTTTACAAGAGGATCTTAATACATGGGTGAATTCTATACCGTTGTCGCCGTTAACATTGGAGGATAACAAAAAGGAGGAAGATGGTGAAGAACGTGTTGGTGATGATCAAGGAAGTGATCAGAAACCTGTTTTCGACCTAATCAATGAAATGAATTCTTTGGATACCAACAGCAGAAGTAGTATTGATCCGGGGCACCAGCCAAGTTTTTTGTTGATCTGTTTGTTACAAATCATTATTTGTGATGATGATGATGATGATGAAGAGGTCTTGTGA 858 0.3718 MNNNISISRNSNGTTQACAACKYQRRKCGTSCILAPYFPHDRQKQFLNAHKLFGVGKITNMIKNVPPHLRDHTMSSIIFQSDMRAMDPVGGCYRFIQQLQSQYEFYQAELHLARQQLAICRASQTAPPNHHYNDMPINHNHNHNDAAMNIINHFNQQHFVDEQMNMNMNMLPQPQPQLQPQYVVDDAGLNPNYVPLQEDLNTWVNSIPLSPLTLEDNKKEEDGEERVGDDQGSDQKPVFDLINEMNSLDTNSRSSIDPGHQPSFLLICLLQIIICDDDDDDEEVL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0391 285 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
Mal4g0391 285 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 251 - -
Mal4g0391 285 MobiDBLite consensus disorder prediction 214 237 - -
Mal4g0391 285 PANTHER LOB DOMAIN PROTEIN 13 251 - -
Mal4g0391 285 MobiDBLite consensus disorder prediction 214 233 - -
Mal4g0391 285 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
Mal4g0391 285 Coils Coil 96 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0391 Mal-Chr4 3255542 3256975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0391 16 121 AS2 family AT3G13850 62.264 6.03e-42 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal4g0391 LOB 8.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0391 - - mtr:MTR_2g100020 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0391 4 3255542 3256975 Mal5g0583 5 9204091 9205239 PCT