Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0390 ATGGCAACCAACATAGCAGAAAGAGTGCAATATCCATTAGACTCTTCCTCCTACAAAATCGTCGACGAGATCGGCGCTGGTAACAGCGCCGTCGTCTACAAAGCAATCTGCATTCCCATAAACTCCACACCAGTAGCTATCAAATCCATAGACTTGGATCGTTCTCGTCCCGACCTCGACGATGTTCGACGTGAAGCAAAGACATTATCACTTCTTTCTCACCCTAACATCCTCAAAGCTCACTGTTCCTTCACCGTAGACCGCCGTCTTTGGGTGGTTATGCCCTTCATGGCTGGAGGTTCATTACAATCCATAATCTCTCACTCTTTCCAAAATGGCTTAACAGAACAATCCATAGCTGTTATTCTCAAAGACACTCTCAATGCTCTTTCTTACCTTCATGGACAAGGACATCTTCATAGAGATATCAAATCTGGTAACATCCTTATTGACTCAAATGGATTAGTAAAACTTGCAGATTTTGGTGTTTCTGCTTCCATTTATGAATCAAACAACTCTGTAGGAGCATGTTCTTCTTATTCATCTTCATCTTCTAATTCTTCTTCTTCTCATATATTTACTGATTTTGCTGGAACACCTTATTGGATGGCTCCTGAAGTTATTCATTCTCATAATGGTTACAGTTTCAAAGCTGATATATGGTCTTTTGGGATAACAGCTTTGGAGTTAGCACATGGAAGACCACCACTTTCTCATCTTCCTCCTTCTAAGTCATTGATGCTTAACATTACAAAGAGGTTTAAGTTTTCTGATTTTGATAAACATAGTTATAAGGGTCATGGTGGTAGTAATAAATTCTCTAAGGCTTTTAAGGATATGGTTGCTTTATGCTTGAATCAAGATCCTACAAAAAGACCTTCTGCTGAGAAGTTGCTTAAGCATTCCTTCTTTAAAAACTGTAAGGGATCAGAGTTTTTGGTGAAGAATGTGTTGAATGGATTGCCTAATGTTGAGAAAAGGTATAATGAGATCAAAGATATAATGGATCCAGATTCAAAGGGTAACGATGATAGTGATGATGATGATGATGAGGGCTCAGTGAAAAATGTGAAACAGAGAAGAATCAGTGGTTGGAATTTCAATGAAGAAGGGCTGAAACTTGAGCCTGTATTTCCAAAGGATCAAAGCAGAGATGATGAAGTTGTGAAACAAGTTAGGTTTGAAGAAGAAAAGGTGATCCAAGAGGATGCTGTTGCTGCATCAGGGATTGTGATGGAGCCAAATACCAATGCTTCTGATGTGGCTGATCATGAAAATGTTGGCGGTGTTGTGAAGAACCGTGAAGCTACGTTGGCGACGCTGAATGTGTTGAAAGAGAGCTTGGAACAAGAACTAGGACAAGTGAAGTTTCTGATGAATATAATTGGTGGAGAAGAGATTCATGTGGCTGATAGTGATGAGAAAATGGTGCAGGAGATCTCTAAGTTGAGGACTGAATTGGAAAATGAGAGGAAGAAGAACTCGCAGCTCGAGTTGCAGCTGGAGAATATCAAGCTTCACCTAATTTCTTCTGCTGTTAATAGTCCTACTAGTTAA 1557 0.3982 MATNIAERVQYPLDSSSYKIVDEIGAGNSAVVYKAICIPINSTPVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDRRLWVVMPFMAGGSLQSIISHSFQNGLTEQSIAVILKDTLNALSYLHGQGHLHRDIKSGNILIDSNGLVKLADFGVSASIYESNNSVGACSSYSSSSSNSSSSHIFTDFAGTPYWMAPEVIHSHNGYSFKADIWSFGITALELAHGRPPLSHLPPSKSLMLNITKRFKFSDFDKHSYKGHGGSNKFSKAFKDMVALCLNQDPTKRPSAEKLLKHSFFKNCKGSEFLVKNVLNGLPNVEKRYNEIKDIMDPDSKGNDDSDDDDDEGSVKNVKQRRISGWNFNEEGLKLEPVFPKDQSRDDEVVKQVRFEEEKVIQEDAVAASGIVMEPNTNASDVADHENVGGVVKNREATLATLNVLKESLEQELGQVKFLMNIIGGEEIHVADSDEKMVQEISKLRTELENERKKNSQLELQLENIKLHLISSAVNSPTS* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0390 518 Coils Coil 431 451 - -
Mal4g0390 518 MobiDBLite consensus disorder prediction 332 357 - -
Mal4g0390 518 Coils Coil 470 507 - -
Mal4g0390 518 Pfam Protein kinase domain 18 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0390 518 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 6 509 - -
Mal4g0390 518 Gene3D Phosphorylase Kinase; domain 1 6 96 - -
Mal4g0390 518 SUPERFAMILY Protein kinase-like (PK-like) 15 308 IPR011009 -
Mal4g0390 518 SMART serkin_6 18 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0390 518 Gene3D Transferase(Phosphotransferase) domain 1 100 351 - -
Mal4g0390 518 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 6 509 - -
Mal4g0390 518 ProSitePatterns Protein kinases ATP-binding region signature. 24 48 IPR017441 GO:0005524
Mal4g0390 518 ProSiteProfiles Protein kinase domain profile. 18 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0390 Mal-Chr4 3253373 3254929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0390 1 494 MAP Kinase Kinase Kinase Kinase AT4G14480 55.040 9.59e-177 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Mal4g0390 Pkinase 1e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0390 K08835 - gmx:100820227 631.713