Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0376 ATGGATAAAAAACTTGAGCTCATCCATGGAACAATTGAGGCTACCATCTTCAATGCAACTCCTTACTTTCCTTCATTTCCTTTCAATTGTTTATTTATAAATGGAAAGCCTGCTTATGTGACAATCAAGATAGACAACAAGAAAGTGGCAAAAACAACACAAGAAAGTGAACGTGTTTGGAACCAAACATTTCAGATTCAGTGTGCTCATCTAGCTGATTCAACTATCACAATTACACTGAAAACATCATGTACCATATTAGGAAAATTCCACATCAAGGCACAACAGTTGAAGGAAGAGAGTTTGATCAATGGATCCTTCCCTCTCCTCATGGAGAATGGGAAACCAAATCAAGAACTAAAATTAAGGTTTATAATATGGTTCAAGCCAGCAAATTTGGAACCAAGTTGGACAAAGCTACTAAGTAGTGAAGACTTTCAAGGGTTGAGGGATGCTACATTTCCACAAAGGTCTAATTGTCATGTTAAGCTCTATCATGATGCTCACCATTCACCTACTTTCCAACCTCCTTTTGAAAATTGTGGAGTTCCTAGAAAACTATGGGAGGATGTTTATAAAGCTATTGAGGGTGCAAAATATTTAGTATATATTGCAGGCTGGTCTTTCAATCCTAAGATGGTTCTGGTTAGAGATCCTCAAACAGAAATCCCACATGCTAGAGAAATAAAGTTAGGTGAGCTATTGAAGAAGAAAGCAGAAGAAGGAGTGGCTGTAAGGATTATGATTTGGGATGATGAAACATCATTTCCATTTATCAAGAACAAAGGTGTGATGAACACACATGATGAGGAAGCTTTTGCTTACTTTAAACACACAAAAGTAGTATGCAGAAGGTGTCCTAGATTACATGACAAATTCCCAACAATCTTTGCTCATCATCAAAAAACCATAACTGTGGATACCAAAGCTCCTAACTCTGTCAATGACAGAGAAATTATGAGCTTTTTGGGTGGTTTAGATTTGTGTGACGGTCGATATGATACCGAGAAACATTCATTGTTTGAAACACTTACTCAGGAATCACATTACCATGATTTCTACCAGACAAACATTGCAGGAGCTAGCCTCAACAAAGGAGGTCCAAGAGAGCCTTGGCATGATGCTCATGCTTGTGTTACCGGCGAAGCGGCTTGGGATGTGTTAACCAATTTTGAACAAAGATGGACAAAGCAATGTGATTCATCTCTTCTACTCCCTGCAAACACCTTAGAAAATCTCATTCCTATTTCCTCAACAAGCACTTCTACGGAAAGGAATTGGAAAGTACAAGTATATCGGTCGATCGACCATGTCTCAGCTAGCCAACTTTTTCGAAAGCTAACAGTTGAGAGTAGCATTCATGAAGCTTACGTTGAAGCAATTAGGCGCGCAGATAGGTTTGTGTACATTGAAAACCAATATTTCATTGGAGGGTGCCATTTGTGGCAGAAAGATAAAAACAGTGGCTGCACAAATTTGATTCCTATTGAGATTGCACTAAAAGTGGTCAACAAGATTAAAGCAAGAGAAAGGTTTGCAGTGTATATAGTCATACCAATGTGGCCAGAAGGAGTGCCTGAAAGTGAACCAGTTCAAGATATACTGCATTGGACAAGAGAAACAATGACAATGATGTATAAGTTGATTGGAGAAGCGATCGTAGAAAGCGGTGAGCCAGGACATCCAAGAGATTACTTGAATTTCTTTTGCCTTGCAAATAGAGAAAAGAAGGAAAATGAAGAATATCTTCCTCCACATTCTCCTCTTCCTGATACTCAATACTGGAGTGCACAGAAAAATAGAAGATTTATGGTTTATGTTCACTCCAAGCTCATGATAGTGGATGACCTATATATACTAATAGGATCAGCAAATGTGAACCAAAGATCGATGGACGGGCAAAGGGACACAGAGATTGCGATAGGAGGCTTCCAGTCTAATCAAAATGGAGTTGATCACTACACGAGCAAAGGTGACATTCATGCATACAGAATGTCAATGTGGTATGAACACACTGGTAGTGCTGAGAAGTTGTTTTTAGAGCCAGAAAGCTTAGAATGTGTGCAGAAAATGTGCTCAATAGGAGATAAAATGTGGAAAATTTATAGTAGTGAAGAAATTGTGGACATGGAAGGTGTGCACTTAGTAACCTACCCTATGATAGTAACACAAGATGGAACTGTGGAGGACTTAACTAATGGTGAGGATCATTTTCCTGATACAGAAGCACTAGTGAAAGGGAGAAGATCAAAAGTATTACCATCTGTCATTACCACTTAG 2280 0.3882 MDKKLELIHGTIEATIFNATPYFPSFPFNCLFINGKPAYVTIKIDNKKVAKTTQESERVWNQTFQIQCAHLADSTITITLKTSCTILGKFHIKAQQLKEESLINGSFPLLMENGKPNQELKLRFIIWFKPANLEPSWTKLLSSEDFQGLRDATFPQRSNCHVKLYHDAHHSPTFQPPFENCGVPRKLWEDVYKAIEGAKYLVYIAGWSFNPKMVLVRDPQTEIPHAREIKLGELLKKKAEEGVAVRIMIWDDETSFPFIKNKGVMNTHDEEAFAYFKHTKVVCRRCPRLHDKFPTIFAHHQKTITVDTKAPNSVNDREIMSFLGGLDLCDGRYDTEKHSLFETLTQESHYHDFYQTNIAGASLNKGGPREPWHDAHACVTGEAAWDVLTNFEQRWTKQCDSSLLLPANTLENLIPISSTSTSTERNWKVQVYRSIDHVSASQLFRKLTVESSIHEAYVEAIRRADRFVYIENQYFIGGCHLWQKDKNSGCTNLIPIEIALKVVNKIKARERFAVYIVIPMWPEGVPESEPVQDILHWTRETMTMMYKLIGEAIVESGEPGHPRDYLNFFCLANREKKENEEYLPPHSPLPDTQYWSAQKNRRFMVYVHSKLMIVDDLYILIGSANVNQRSMDGQRDTEIAIGGFQSNQNGVDHYTSKGDIHAYRMSMWYEHTGSAEKLFLEPESLECVQKMCSIGDKMWKIYSSEEIVDMEGVHLVTYPMIVTQDGTVEDLTNGEDHFPDTEALVKGRRSKVLPSVITT* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0376 759 SUPERFAMILY Phospholipase D/nuclease 145 406 - -
Mal4g0376 759 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 603 630 IPR001736 GO:0003824
Mal4g0376 759 PIRSF PLD_plant 6 759 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mal4g0376 759 Pfam Phospholipase D C terminal 676 748 IPR024632 -
Mal4g0376 759 SMART pld_4 603 630 IPR001736 GO:0003824
Mal4g0376 759 SMART pld_4 295 332 IPR001736 GO:0003824
Mal4g0376 759 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 295 332 IPR001736 GO:0003824
Mal4g0376 759 PANTHER PHOSPHOLIPASE D 4 759 IPR015679 -
Mal4g0376 759 Pfam Phospholipase D Active site motif 296 332 IPR001736 GO:0003824
Mal4g0376 759 Pfam Phospholipase D Active site motif 606 630 IPR001736 GO:0003824
Mal4g0376 759 Gene3D C2 domain 32 134 IPR035892 -
Mal4g0376 759 Pfam C2 domain 38 109 IPR000008 -
Mal4g0376 759 PANTHER PHOSPHOLIPASE D ALPHA 4 759 - -
Mal4g0376 759 SUPERFAMILY Phospholipase D/nuclease 422 688 - -
Mal4g0376 759 Gene3D Endonuclease Chain A 445 657 - -
Mal4g0376 759 Gene3D Endonuclease Chain A 172 425 - -
Mal4g0376 759 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 8 123 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0376 Mal-Chr4 2892274 2895949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0376 30 759 Phospholipase D Gene Family (Wang group) AT1G55180 62.231 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0376 K01115 - gmx:100807431 1331.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0376 4 2892274 2895949 Mal4g0376 4 2892274 2895949 ECH
Mal4g0376 4 2892274 2895949 Mal5g0566 5 8800481 8804434 PCT