Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0374 ATGGGAATTGACAACGAAGAAGATCATCTTGAAAACCCAACCAAAAGACATAAATGCTCGGCGTGCTATAAGCAATATAAGAAGAAGGAACATCTTATTGAGCACATGAAAACTGCTTACCACTCTAACCATCAACCTAGATGTGTGGTTTGTAAAAAGCACTGCAAAACTTTTGAATCGCTGAGGGAACATCTCATCGGCCCTTTGGCTAAAGGAGTTTGTTCGGCGATTTTCTCTCAATGGGGTTGTCAACTTTGTTTGACACTATTTGACACTCCCGCTTCTCTCAATGACCATAGAGAAACTTGTCGCCTAGCTGCCCCTGCTCCTCTGGGCACAAACGAATTTCCTTACCATATTGATATTCTGGATTGTTCTGATGAAAATGATGTTGACTGGCGCCCTAGAGCAATTGCAATGGACTGTGAAATGGTTGGTGGTGGAAGTGATGGATCACTGGAACTTTGTGCTAGAGTGTGCTTGGTTGATGAGGATGAGAACTTAATCTTCCAGACATATGTAAAACCTCAAATCCCTGTTACTAATTACAGGTATGATTTAACTGGGTTGACAGAAGAGCATCTTCGAGATGGTATGCCACTTAAGGAAGTTCGGGAAAAGATTTTACAAATTTTATACAATGGAGAATCAATTGGAAAAGTTAGGTTGGATGGTGGAAAGGCCAGGCTTCTTGTAGGGCATGATTTGGCACATGATTTTGATTGCTTGGGAATGAGTTATCCTGATCTCTTGATAAGAGACACTGCAAAGTACCGTCCATTGATGAAGACAAACTTGACCTGCCATTCGCTCAAGTATCTTACCCGAACATATCTAGGTTATAATATCCAAGCCGGCACTCACGACCCGTATGAAGATTGTATTTCTGTGATGAGGCTGTATAAGAGAATACGAGGTCAAAGTCATGAGGAAGAAGGATACAGAAAGTTGACTCCAAGTGACAGCATTGTCGACATGTGCGACAGTTGGAGATCCAAGGAACTTGACAACCTCACGCCAGATGAACTTTATGCCATCTCAAAATCAGATTATAGGTGTTGGTGTTTAGATTTGAAGCCAAGATTAGCTTGA 1092 0.4167 MGIDNEEDHLENPTKRHKCSACYKQYKKKEHLIEHMKTAYHSNHQPRCVVCKKHCKTFESLREHLIGPLAKGVCSAIFSQWGCQLCLTLFDTPASLNDHRETCRLAAPAPLGTNEFPYHIDILDCSDENDVDWRPRAIAMDCEMVGGGSDGSLELCARVCLVDEDENLIFQTYVKPQIPVTNYRYDLTGLTEEHLRDGMPLKEVREKILQILYNGESIGKVRLDGGKARLLVGHDLAHDFDCLGMSYPDLLIRDTAKYRPLMKTNLTCHSLKYLTRTYLGYNIQAGTHDPYEDCISVMRLYKRIRGQSHEEEGYRKLTPSDSIVDMCDSWRSKELDNLTPDELYAISKSDYRCWCLDLKPRLA* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0374 363 SUPERFAMILY Ribonuclease H-like 137 304 IPR012337 -
Mal4g0374 363 CDD REX4_like 138 302 IPR037431 GO:0006364|GO:0008408
Mal4g0374 363 Gene3D - 134 318 IPR036397 GO:0003676
Mal4g0374 363 Gene3D Classic Zinc Finger 3 67 - -
Mal4g0374 363 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 12 360 - -
Mal4g0374 363 ProSiteProfiles Zinc finger C2H2 type domain profile. 17 46 IPR013087 -
Mal4g0374 363 SMART exoiiiendus 136 310 IPR013520 -
Mal4g0374 363 PANTHER EXONUCLEASE FAMILY PROTEIN 12 360 - -
Mal4g0374 363 Pfam Exonuclease 138 301 IPR013520 -
Mal4g0374 363 ProSitePatterns Zinc finger C2H2 type domain signature. 19 41 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0374 Mal-Chr4 2882028 2884970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0374 14 357 C2H2 Transcription Factor Family AT3G27970 52.299 1.42e-133 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0374 K18327 - gmx:100805841 575.474