Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0373 ATGAGTCGAGAACAATCGAAGCGGGGGAAGCATGAAAAAGGTTCTGATGGTGCTGGAAAGGTTATTGTTGCTGTCAAGGCATCAAAGGATATTCCAAAGACTGCTCTTGTTTGGTCTCTAACTCATGTTGTTCAACCTGGTGATTGCATTACATTGCTAGTGGTTGTACCTTCACAAAGTTCAGGCCGAAAATTATGGGGTTTTCCGAGGTTTGCTGGTGACTGTGCTAATGGACACAAGAAGTCAACAATGCTGGGAGCTAGTTCAGAGCACAAAAATGATATCACTGATTCTTGCTCTCAAATGATCCTTCAGCTCCATGATGTCTATGATCCAAAGAAGATAAATGTCAGGATTAAAATTGTTTCTGGATCACCTTGTGGAGCAGTGGCTGCAGAAGCCAAGAAAGCTCAGGCCAATTGGGTTGTATTAGACAAACAGCTCAAGCATGAGGAAAAACAATGCATGGAAGAGCTGCAGTGCAACATTGCGGTTATGAAAGGTTCCCAAGCTAAGGTACTTCGCTTGAATTTGGTTGGATCACAAAAGAAGGATCTTGAAGAAACATGTCCATTAACTTCCGAGCAGCATGTGATGCCTGGAAAACAATCCAAGAAGAAAAATGGTTACTTAAATTCCACCACAATAGGGCAAGTTGTCACGCCAACTAGCAGCCCCGAGCTAGAGACATCATTTACTGTAACTGAAGTTGGAACTTCATCGGTTTCAAGCTCTGATCCTGGAACTTCACCTTTTTTCGCCTCTGAGATCATTGTCGAGTCAAAGAAAGAGGAAACTATCAACGAAAATCAAGAAACTGATGATATCATTTCTGACTCAGACAGTGAAAATTTGTCCGCTTCTTCAGCAAGCTTGAGGTTTCAGCCGTGGATTGCAGATTTATTTTTACATAAACAATCATCTCAACGTGAAGACGAAAGGTCGGACTCAGAGAGATCTTGTGACAGGCTTCAAATGTCTACAACAACTAGAGCTTTGCTAGAAAAGTTCTCGAGGCTTGACAGAGAAGCCGAAATTGAAACCTCAACCTATAAGACTAACATGGAATTCAGTGGAAGCGTAAGAGAAGCGGTAGCATTATCTAGAAATGCCGCACCTGGCCCACCTCCATTATGTTCATTATGTCAACACAAAGCTCCTGTTTTTGGAAAACCTCCAAGATGGTTCAACTATGCTGAGTTGGAGCAAGCCACTTGTGGATTTTCACAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCCGTTCACAGAGGAGTTCTACCAGAAGGGCAAGTCATTGCTGTCAAGCAACATAAGTTGGCTAGTTCTCAGGGTGATCTTGAATTCTGCTCAGAGGTAGAAGTCCTGAGTTGTGCACAGCACCGGAATGTTGTTATGCTGATTGGGTTCTGTATTGAGGATAAGAGAAGGCTGCTGGTTTATGAATATATATGCAATGGATCATTGGACACTCATTTATATGGGAGACAACGGAAACCATTAGAATGGTCTGCACGTCAGAAAATTGCTGTCGGAGCTGCTCGAGGGTTGCGATATCTACATGAAGAGTGCAGAGTGGGATGCATTGTTCACCGTGATATGCGGCCTAACAACATTCTTATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACTGGAGAGGAGACTAGAGTTATTGGAACATTTGGGTATTTGGCTCCTGAATATACCCAAAGTGGACAAATAACTGAAAAGGCTGATGTTTATTCCTTTGGGGTGGTATTAGTGGAGCTTGTGACAGGGCGTAAAGCTGTGGATGTCAATCGGCCCAAGGGACAACAGTGTCTTACGGAGTGGGCACGACCACTGTTAGAAGAGTACGCCATTGAAGAACTGATTGATCCAAGGTTGGGAAGTCACTATTCAGAACATGAAGTCTCTTGCATGATAAATGCGGCATCCTTATGCATAAGGCGAGATCCTTATTCTAGACCACGCATGTCACAGGTTTTGCGAATACTAGAGGGTGACACGGTCATGGAATCGCCGCGCCATTATGGTGGTTCTCCTTCCCTTTGA 2091 0.4385 MSREQSKRGKHEKGSDGAGKVIVAVKASKDIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRKLWGFPRFAGDCANGHKKSTMLGASSEHKNDITDSCSQMILQLHDVYDPKKINVRIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKQCMEELQCNIAVMKGSQAKVLRLNLVGSQKKDLEETCPLTSEQHVMPGKQSKKKNGYLNSTTIGQVVTPTSSPELETSFTVTEVGTSSVSSSDPGTSPFFASEIIVESKKEETINENQETDDIISDSDSENLSASSASLRFQPWIADLFLHKQSSQREDERSDSERSCDRLQMSTTTRALLEKFSRLDREAEIETSTYKTNMEFSGSVREAVALSRNAAPGPPPLCSLCQHKAPVFGKPPRWFNYAELEQATCGFSQANFLAEGGFGSVHRGVLPEGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDTHLYGRQRKPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGEETRVIGTFGYLAPEYTQSGQITEKADVYSFGVVLVELVTGRKAVDVNRPKGQQCLTEWARPLLEEYAIEELIDPRLGSHYSEHEVSCMINAASLCIRRDPYSRPRMSQVLRILEGDTVMESPRHYGGSPSL* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0373 696 CDD USP_Like 20 144 - -
Mal4g0373 696 Pfam Protein kinase domain 412 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0373 696 ProSiteProfiles Protein kinase domain profile. 408 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g0373 696 SUPERFAMILY Protein kinase-like (PK-like) 392 680 IPR011009 -
Mal4g0373 696 PANTHER OS01G0253100 PROTEIN 16 686 IPR045271 GO:0004714|GO:0006468
Mal4g0373 696 Gene3D Phosphorylase Kinase; domain 1 380 483 - -
Mal4g0373 696 ProSitePatterns Tyrosine protein kinases specific active-site signature. 529 541 IPR008266 GO:0004672|GO:0006468
Mal4g0373 696 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 686 - -
Mal4g0373 696 CDD STKc_IRAK 414 680 - -
Mal4g0373 696 Gene3D Transferase(Phosphotransferase) domain 1 484 690 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0373 Mal-Chr4 2870146 2873965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0373 395 686 Trihelix Transcription Factor Family AT5G38560 51.007 2.73e-99 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mal4g0373 Pkinase 2.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0373 - - gmx:100789216 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0373 4 2870146 2873965 Mal4g0373 4 2870146 2873965 ECH
Mal4g0373 4 2870146 2873965 Mal5g0563 5 8783683 8788190 PCT