Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0366 ATGGCAACAGTACCTGGACCACTTGTTTGGGAGATCGTGAAGAGGAACAACTCATTCTTGGTCAAAGAGTTTGGAAATAACACCCAGAGTGTTCAATTCAGCAGAGAACCCAATAATCTATACAACCTCAACACCTTCAAATACTCTGGTTTGGCCAACAAGAAAACTGTTACTATTCAGCCTGCTGGTAAAGATCAGTCCGTGTTGTTGGCAACCACCAAGCCAAGAAAGCAAAACAAGCCTGCATCTTTGCTTCACAAATCTGTAATGAAGAAAGAGTTCAGGAGGATGGCTAAGGCTGTTCAAAATCAGGTGGCAGATAACTACTACAGACCTGACCTCAAGAAGGCGGCTCTTGCAAGGTTGAGTGCTGTCAATAGGAGCCTCAGAGTTACAAAGTCTGGCGCAAAGAAGAGAAACAGACATGCTGGAAAGAAGTGA 441 0.4422 MATVPGPLVWEIVKRNNSFLVKEFGNNTQSVQFSREPNNLYNLNTFKYSGLANKKTVTIQPAGKDQSVLLATTKPRKQNKPASLLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALARLSAVNRSLRVTKSGAKKRNRHAGKK* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0366 146 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 145 - -
Mal4g0366 146 Gene3D - 7 133 - -
Mal4g0366 146 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Mal4g0366 146 PANTHER 60S RIBOSOMAL PROTEIN L28 1 145 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0366 Mal-Chr4 2745859 2748944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0366 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 69.930 3.53e-72 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0366 K02903 - gmx:100500189 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g0531 5 8297117 8299305 Mal4g0366 4 2745859 2748944 ECH
Mal4g0366 4 2745859 2748944 Mal4g0366 4 2745859 2748944 ECH
Mal4g0366 4 2745859 2748944 Mal5g0531 5 8297117 8299305 PCT