Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0342 ATGGACGCTGCGCAGCTATCCTCATACGCCGCCGGCGGAAACGGAGATCCGGCGCCGTTTATTCAGAAGACGTATGACATGGTGGACTATTCCGCGACGGACGATATCGTCTCGTGGAGCTTTACTAACAACAGCTTCGTCGTTTGGAACCCTCTCGAATTCGCTCGCGTTCTCCTCCCAACCTATTTCAAGCACAGCAATTTCTCCAGTTTCATCCGTCAGCTCAATACCTATGGATTTCGAAAAATAAATTCGGAGCGTTGGGAGTTTGCTAATGAAGAATTTATAAAAGATCAAAAACATCTTCTGAAGAATATACACCGCAGGAAACCTATCCACAGTCATGGTCATCCTCCGGGTTCTGCTGTAGATCCAGAAAGGGCATCTTTAGAGGAAGAAATAGAGAAGCTTTCCCACGAGAAAAATTCTCTTGAATCCAATGTCTTAAACTACAAACATCAGCAGTCCACAACAAAGCTTCAACTGGAAGATTTTCAACAGGGATTGAATGACATGGAGATGAGGCAGGCAAGTTTGTTGAACTTCTTTGAGAAGGCTCTTCAGAATCCTTCTTTTGTTGAATATCTTACGCACAAAATCGAATCCATGGATGTGGCGGCATATAATAAGAAAAGACGATTGCCTCATGTTGATCACGTGCAGCCTGTTGCTGCATGTAGCTTGATAGACAATCATAGCAATTTCAGATTGGAATTTGGAAACGTTTTCCATCGAGATTTCTCGAATAAACTCAGATTGGAATTGTCAACATCCGTGTCAGATATGAACTTGGTATCATGTAGCACACATGGTTCAAATGAAGATGAGGAAAGCCTACATAAAAATTTGTCTGAAGGAGAACTGACAGAAACGCAGACAAGAACTGACCTTGCTTTTGCACCTGAAACATTAGAGCTCGCAGATACTGGGGCATCTTTTACTTTTAACATGGATTCATGTTTATCACAAAGAGCAACAACTACTGAGAGCCCAAAACTTCAATCTCTAGAGCCAAGTAGTGAAGAAGGTGATAGTCATATATCCTGCCAACTAAATTTAACTCTGGCATCTTGTACATTAGAATTCAATAGGAATTCATACTCGGCCAAGTCACCCCAGATAGACTGTCAGGAAATTGACAATTTCACAGAAGCAAGAGTTAACGCCAGTGGTAAAGAATCTGAAATTGGAGTTTCCTCAAACCGAAATGTGGCTAACGAGGTTATCAATTTAGCTTCACCGCAGCAGGCTTCAAGTATCGTCCAAGTCAAACCAGTTGCTACACAAAGAGTGAATGACTTGTTTTGGGAACAATTCCTCACTGAAAGACCAGGTTGTTCAGACAATGAAGAGGCAATATCCAACTATCGAGCAAATCCATATAATGAGCAAGAAGAAGGGCAGTCAGTTCATAGAATTTCCAGTAACATCGAGAACATGAATAATCTCACCCTTTAA 1458 0.417 MDAAQLSSYAAGGNGDPAPFIQKTYDMVDYSATDDIVSWSFTNNSFVVWNPLEFARVLLPTYFKHSNFSSFIRQLNTYGFRKINSERWEFANEEFIKDQKHLLKNIHRRKPIHSHGHPPGSAVDPERASLEEEIEKLSHEKNSLESNVLNYKHQQSTTKLQLEDFQQGLNDMEMRQASLLNFFEKALQNPSFVEYLTHKIESMDVAAYNKKRRLPHVDHVQPVAACSLIDNHSNFRLEFGNVFHRDFSNKLRLELSTSVSDMNLVSCSTHGSNEDEESLHKNLSEGELTETQTRTDLAFAPETLELADTGASFTFNMDSCLSQRATTTESPKLQSLEPSSEEGDSHISCQLNLTLASCTLEFNRNSYSAKSPQIDCQEIDNFTEARVNASGKESEIGVSSNRNVANEVINLASPQQASSIVQVKPVATQRVNDLFWEQFLTERPGCSDNEEAISNYRANPYNEQEEGQSVHRISSNIENMNNLTL* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0342 485 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 12 480 IPR027725 -
Mal4g0342 485 SUPERFAMILY "Winged helix" DNA-binding domain 16 109 IPR036390 -
Mal4g0342 485 Coils Coil 127 154 - -
Mal4g0342 485 PRINTS Heat shock factor (HSF) domain signature 71 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal4g0342 485 PRINTS Heat shock factor (HSF) domain signature 58 70 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal4g0342 485 PRINTS Heat shock factor (HSF) domain signature 20 43 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal4g0342 485 ProSitePatterns HSF-type DNA-binding domain signature. 59 83 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal4g0342 485 Gene3D - 14 110 IPR036388 -
Mal4g0342 485 Pfam HSF-type DNA-binding 20 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mal4g0342 485 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-5 12 480 - -
Mal4g0342 485 SMART hsfneu3 16 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0342 Mal-Chr4 2502452 2505238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0342 20 485 HSF AT4G13980 51.899 5.85e-150 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mal4g0342 HSF_DNA-bind 1.3e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0342 K09419 - gmx:100786408 704.901