Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0337 ATGGGAAAAGCTACTAGGTGGTTGAAGGGTTTGTTTGGAATGAAGAAAGAGAAGGATCACAGTAAGAAATCAGGGCCATTGGTTCTTGACAAGAAGGAGAAGAAAAGATCAGGGAAAGATGATAATCACATTGATCATCAGAGTCACATTCCTCAAACTAATGCTTCAGGTTTTGATAATGCTTGGTACAGATCCTATGTTGCTGAAAAACAAAAACAGAATGAGCATAACAAAAATGCAATTTTTGTGAGGTCATTAAGCCATGGTAGTGGCAGATTGTTATTTGGAAGCAGGGAGATATTGGCTGCTGTAAAGATTCAATCTTTTTTCAGAGGCTATTTGGCGCGAAAGGCTCATAGGGCACTAAAAGGATTGGTTAAGATACAAGCTCTTGTTAGAGGGTTCCTAGTTAGAAAAAGGGTTGCTGCAACACTTCACAGTATGCAAGCTCTCATGAGAGCTCAAGCTGTTGTCCGGTCAAGGCGAGCCCGTAACTCCATGGACAAGGAGAACGTATATCAGCCAGAAATCCGTGGACGAAAACATGTTCAACTGTTTGATGAAACTAGAAATCAACAACAGAATAAATGGCTTCCCAATTCCTCAAGTAGATTTGCTCCGAAACCGAAAATTGTTCTGATTGATCCTCACAGGTCTAGTTTGAGATCTGCAATGTCCGAATCTGGAAATGATCTGTATGACTACTATGAAGCAACATCTCTTCCTTGTCAAATTCCGCGTCGAATCTCAGTTCATGAATGCCAATATTATGAAGATTTTGATTGGTGCTACAATAATGTTAACGATGAACGCAAGTTCTGCACAGCTCATAGCACTCCTCGATTAGTGAATTCTTCGCAAGCTAATACTCCGGTGAAAAGTGTTTCAGAAGACACCAGCTTGTTCATGCCTTACTCAAATTTTCCTAACTACATGGCTAATACTCATTCATCTAAGGCAAGAGTGGTAAGGTCTCACAGTGCTCCAAAGCAAAGACCTGAGCTCAAGAAAAGGGTTCCACTTGATGAAATAATGGCCACAAGAAATAGCATAAGTTGTGTTAGAATGCATTTGTAA 1077 0.403 MGKATRWLKGLFGMKKEKDHSKKSGPLVLDKKEKKRSGKDDNHIDHQSHIPQTNASGFDNAWYRSYVAEKQKQNEHNKNAIFVRSLSHGSGRLLFGSREILAAVKIQSFFRGYLARKAHRALKGLVKIQALVRGFLVRKRVAATLHSMQALMRAQAVVRSRRARNSMDKENVYQPEIRGRKHVQLFDETRNQQQNKWLPNSSSRFAPKPKIVLIDPHRSSLRSAMSESGNDLYDYYEATSLPCQIPRRISVHECQYYEDFDWCYNNVNDERKFCTAHSTPRLVNSSQANTPVKSVSEDTSLFMPYSNFPNYMANTHSSKARVVRSHSAPKQRPELKKRVPLDEIMATRNSISCVRMHL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0337 358 MobiDBLite consensus disorder prediction 1 56 - -
Mal4g0337 358 ProSiteProfiles IQ motif profile. 102 127 IPR000048 GO:0005515
Mal4g0337 358 MobiDBLite consensus disorder prediction 10 47 - -
Mal4g0337 358 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 348 - -
Mal4g0337 358 Pfam Protein of unknown function (DUF4005) 283 352 IPR025064 -
Mal4g0337 358 SMART iq_5 121 142 IPR000048 GO:0005515
Mal4g0337 358 SMART iq_5 98 120 IPR000048 GO:0005515
Mal4g0337 358 Pfam IQ calmodulin-binding motif 102 120 IPR000048 GO:0005515
Mal4g0337 358 Pfam IQ calmodulin-binding motif 126 140 IPR000048 GO:0005515
Mal4g0337 358 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Mal4g0337 358 Gene3D - 125 172 - -
Mal4g0337 358 Gene3D - 60 124 - -
Mal4g0337 358 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 142 IPR027417 -
Mal4g0337 358 PANTHER IQ-DOMAIN 5-RELATED 1 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0337 Mal-Chr4 2465711 2467575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0337 1 356 IQD Protein Family AT3G16490 40.150 6.76e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0337 - - gmx:100797686 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0337 4 2465711 2467575 Mal4g0337 4 2465711 2467575 ECH
Mal4g0337 4 2465711 2467575 Mal5g0468 5 6929827 6931866 PCT