Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0331 ATGACTCGGCGGTGCTCTCACTGCAGCAACAACGGCCATAACTCACGGACATGTCCGTCGAGAGGTGGCGGCGGGGTGAAGCTTTTTGGTGTTAGATTAACCGATGGATCAATCATTAAAAAAAGCGCGAGTATGGGAAACCTAAACCTCGCTGCTCTTCACCATTGTTCTTCTTCTTCACCGCTGAACCCCGGTTCATCGCTTAATCCCGGTTCACCTTGTTCTGACCCGCCTCATGACCCGGACGGTTATTTATCTGATGACCCGGCTCATGCTTCTGGTTTCGTCACCCGCCGCGGCGAAAGAAAAAAAGGTGTTCCATGGACTGAAGAAGAACATCGGTTATTCTTGGTTGGACTTAATAAGCTAGGCAAAGGAGACTGGCGTGGGATAGCACGTAATTTTGTTGTGTCTAGGACCCCTACTCAAGTAGCAAGTCATGCACAAAAGTACTTTATCCGGCAGAGTAATGCTACCAGGAGAAAGAGACGTTCCAGTCTTTTCGACATGGCTCCAGATATGTGTCCAGATTCAACTTCGATGCCAGAAGAACAAGCACTACTTCCACCTTCTGAGAACTCACAACCTTGTAATGGAAAATCACTACCATCACTAAATCTGTCTCTCAAGTCAGAATATGAACCAATGGAAACTACATCTGAAGAAAATGAAGAAGAGGCTAGTGAAACAAAAATGGGATCAAATGGATTGACACCAATGACTCAAGGATTCTTCCCATCTTATGTACCTGTCTCATTTTCTGTATGGCCATCAATTGGAGCTCCCTTTGAAGAAATCAACGGAGGAGAGACGACACCTCATCATCAGGTCCTCAAGCCAATACCGGTCATTCCAAAGGAACCTGTCAATGTTGATGAACTTGTGGGAATGTCTCATCTGAGCATTGGGGAAACACAAGCACTTGATAGAGAGCCTTCCCCACTTTCTTTGAGGTTGTTAGGAGAGCCGTCAAGGCAATCAGCATTCCATGCAAATGCTCCAGTTGGTGGTTCTGATATAAACAGTGGCAAGAACAACGCCATTCAAGCGGTCTGA 1056 0.4631 MTRRCSHCSNNGHNSRTCPSRGGGGVKLFGVRLTDGSIIKKSASMGNLNLAALHHCSSSSPLNPGSSLNPGSPCSDPPHDPDGYLSDDPAHASGFVTRRGERKKGVPWTEEEHRLFLVGLNKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSNATRRKRRSSLFDMAPDMCPDSTSMPEEQALLPPSENSQPCNGKSLPSLNLSLKSEYEPMETTSEENEEEASETKMGSNGLTPMTQGFFPSYVPVSFSVWPSIGAPFEEINGGETTPHHQVLKPIPVIPKEPVNVDELVGMSHLSIGETQALDREPSPLSLRLLGEPSRQSAFHANAPVGGSDINSGKNNAIQAV* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0331 351 MobiDBLite consensus disorder prediction 162 238 - -
Mal4g0331 351 PANTHER OS01G0187900 PROTEIN 1 345 - -
Mal4g0331 351 SUPERFAMILY Homeodomain-like 102 157 IPR009057 -
Mal4g0331 351 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 103 155 IPR006447 GO:0003677
Mal4g0331 351 MobiDBLite consensus disorder prediction 184 214 - -
Mal4g0331 351 MobiDBLite consensus disorder prediction 328 351 - -
Mal4g0331 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 100 156 IPR017930 -
Mal4g0331 351 CDD SANT 107 152 IPR001005 -
Mal4g0331 351 MobiDBLite consensus disorder prediction 59 92 - -
Mal4g0331 351 MobiDBLite consensus disorder prediction 1 18 - -
Mal4g0331 351 ProSiteProfiles Myb-like domain profile. 100 152 IPR001005 -
Mal4g0331 351 ProSiteProfiles SANT domain profile. 108 156 IPR017884 -
Mal4g0331 351 SMART sant 104 154 IPR001005 -
Mal4g0331 351 MobiDBLite consensus disorder prediction 59 73 - -
Mal4g0331 351 MobiDBLite consensus disorder prediction 1 21 - -
Mal4g0331 351 Gene3D - 106 157 - -
Mal4g0331 351 Pfam Myb-like DNA-binding domain 107 152 IPR001005 -
Mal4g0331 351 PANTHER TRANSCRIPTION FACTOR KUA1 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0331 Mal-Chr4 2344585 2349005 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal4g0331 Myb_DNA-binding 2.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0331 - - gmx:778036 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0331 4 2344585 2349005 Mal4g0331 4 2344585 2349005 ECH