Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0310 ATGGCTGGCATAGCATTTGGACGATTTGATGATTCTTTTAGTGTGACCTCCATCAAGGCCTATATTGCTGAGTTCATCTCAACCTTGATCTTTGTTTTTGCTGGTGTTGGTTCAGCCATAGCCTATGCTAAGTTGACATCAGGTGCAGCTCTTGATCCTGCTGGATTAGTAGCTGTTGCTGTTTGTCATGGTTTTGCTCTTTTTGTTGCTGTTTCTGTTGGAGCCAACATATCTGGTGGACATGTCAACCCTGCTGTGACCTTTGGATTGGCTATTGGGGGACAGATCACAATCCTCACTGGTATCTTCTACTGGATTGCACAACTTCTTGGCTCCATAGTTGCATGCTTTCTCCTCAAGTTTGCCACAGGAGGCTTGACAATTCCAATCCACAGTGTTGCTTCTGGTGTTGGAGCTAGTGAAGGAGTTGTGACAGAAATTATCATAACATTTGGATTGGTGTACACAGTGTATGCCACAGCAGCTGATCCTAAGAAAGGTTCATTAGGGACAATTGCACCAATTGCTATTGGTCTCATTGTTGGTGCAAATATCTTAGCAGCAGGACCATTCTCTGGTGGGTCAATGAATCCAGCACGTTCATTTGGGCCAGCAGTTGTTAGTGGTGATTTCCATGACAACTGGATCTATTGGGTTGGACCTCTTATTGGTGGTGGTTTGGCTGGTGTCATATATGGCTATGTCTTCATGCCCTCAGATCATGTACCTTTGGCTAGTGATTTTTGA 747 0.4444 MAGIAFGRFDDSFSVTSIKAYIAEFISTLIFVFAGVGSAIAYAKLTSGAALDPAGLVAVAVCHGFALFVAVSVGANISGGHVNPAVTFGLAIGGQITILTGIFYWIAQLLGSIVACFLLKFATGGLTIPIHSVASGVGASEGVVTEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGLIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHDNWIYWVGPLIGGGLAGVIYGYVFMPSDHVPLASDF* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0310 248 TIGRFAM MIP: MIP family channel proteins 23 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g0310 248 PANTHER AQUAPORIN-8 1 248 IPR034294 -
Mal4g0310 248 Pfam Major intrinsic protein 14 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g0310 248 CDD MIP 19 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g0310 248 SUPERFAMILY Aquaporin-like 13 242 IPR023271 -
Mal4g0310 248 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Mal4g0310 248 Gene3D Glycerol uptake facilitator protein. 2 246 IPR023271 -
Mal4g0310 248 PANTHER MIP PROTEIN 1 248 - -
Mal4g0310 248 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g0310 248 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g0310 248 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g0310 248 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g0310 248 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mal4g0310 248 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0310 Mal-Chr4 2012433 2013769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0310 1 248 Major Intrinsic Protein MIP AT3G16240 82.400 1.22e-144 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0310 K09873 - gmx:100803901 439.113