Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0302 ATGTCTACACCATTAGAACATGATTACATATGTTTGGCAGATAATACTTCTTCAATGGATGATAAGACTTCATCTCTCAATTTCAAGGAGACAGAGCTGAGACTAGGCTTACCTGGTTGTGAATCTCCTGATAGAAAATCAGTTGCTGCTGCTGGTGGAGTCTCTTTCTTTGCCAACAAGGATTTGAACAACATTAATGTTTGTTCTCCTTTGAAGAACCTTGTAGCTAGTGTTGGAGCTAAAAGAGGTTTCTCTGATGCTATTGATGAATCTTCTAGTAAATGGGGTTTCTCTATGAATGATGGATCTGAAGGAGCTGCTTTGTTTTCTCCTAGAGGAGGGAATGTTGGAAAAACTCTTGTTGGTTTTGAGACTCAAACTAATATTCAGAAGACTAATACAAATGCAACAAAAAACATCAAAGAGATTCTTCAACAATCTGTGCATGAAAAGAATAAACAAGTTGTTGGAACAAATGAACATGCTAATGCTCCTGCTGCAAAGGCACAGGTTGTGGGATGGCCACCAATTCGATCGTTTCGAAAGAACACGATGGCATCGAATTTGACAAAGAACAATGATGAAGCTGAGGGGAAAACAGGATTTGATTGTCTCTATGTAAAAGTCAGTATGGATGGTGCTCCTTATCTCAGAAAAGTTGATCTCAAAATTTACAACAACTATATGGAACTTTCTTCAGCTCTTGAGAAGATGTTCACCTGCTTTACCATTGGTCAATGCAATTCTCCTGGACTTCCGGGGAAAGATGGACTAAGTGAGAGCTCTTTGAGGGATCTTCTTCATGGATCTGAATATGTTCTTACATATGAAGATAAAGATGGAGATTGGATGCTTGTAGGTGATGTTCCTTGGGGGATGTTCGCCGACTCATGTAGGAGACTAAGGATCATGAAAGGCTCCGAGGCAATTGGACTAGCTCCAAGAGCCATGGAAAAATCTAGGAGCCAAAACTAG 975 0.399 MSTPLEHDYICLADNTSSMDDKTSSLNFKETELRLGLPGCESPDRKSVAAAGGVSFFANKDLNNINVCSPLKNLVASVGAKRGFSDAIDESSSKWGFSMNDGSEGAALFSPRGGNVGKTLVGFETQTNIQKTNTNATKNIKEILQQSVHEKNKQVVGTNEHANAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKTGFDCLYVKVSMDGAPYLRKVDLKIYNNYMELSSALEKMFTCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWGMFADSCRRLRIMKGSEAIGLAPRAMEKSRSQN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0302 324 ProSiteProfiles PB1 domain profile. 204 306 IPR000270 GO:0005515
Mal4g0302 324 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 15 316 IPR003311 GO:0005634|GO:0006355
Mal4g0302 324 SUPERFAMILY CAD & PB1 domains 204 305 - -
Mal4g0302 324 Gene3D - 199 318 - -
Mal4g0302 324 PANTHER AUXIN-RESPONSIVE PROTEIN 15 316 - -
Mal4g0302 324 Pfam AUX/IAA family 30 315 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0302 Mal-Chr4 1894997 1897117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0302 208 314 B3 DNA Binding Superfamily AT4G23980 29.907 2.39e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mal4g0302 AUX_IAA 4.9e-91 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0302 K14484 - gmx:100804423 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0302 4 1894997 1897117 Mal4g0302 4 1894997 1897117 ECH