Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0299 ATGATGGCTGGAAACCCTAACTGGTGGAGCATGCATCCATCATCTTTGAATATCCCTCCCCAATATATGCTTGGATCTTCTTCAATCCCTTTCAATTCCTTGACTGAAAATAATGCTGAAGTACCTCCTCAATCATGGAGTCAACTACTTTTTACTGGACTACCTGGAGAAGAAGAGAGACTTGGTTTCAATCATTTTCAACCTAAAAACTCAGAAAACTGGGATGTGCAAATTATGAATCCATCTTCAAGAGTTCCTTTTATGGATGTAATAAAGCATGAAGTTTCTCAAAGTGAGAATTTTTATGGCCAACAAGGGCATCATGAGGAGTTTCATGCTAATTCTGGATCACTTGCTTCATCTTGGTCACATATGGTTCCAGTTTCTTCCCCAACTTCTCATGTCACTAGCTTAAGTAGTGATAATATATTGGATTTCACTTATAACAAGATAGATCATAGCAAGAATCAACTACCAGATCAAATATCTGAGTGTAATAGCTCAACTACTGGAGTTAATAAGAAGGCTAGGGTTCAGCCATCTTCAAGCCAACCACCTCTAAAGGTGAGGAAGGAGAAGCTAGGAGATAGAATAACAGCACTTCACCAGCTTGTTTCTCCATTTGGAAAGACTGACACAGCTTCTGTATTATTAGAAGCCATTGGATACATAAGGTTTCTACAGAGTCAAATTGAGGCACTGAGCTCTCCTTACTTGGACACTGCAGCATCAAAAAACATGATGAGGAATCAACATTCTGTGCATATTGAAAGAAATTCTGTATTTCCTGAGGACCCCGGTCAGCTGTTGGATGACACTGGCCTAAAAAGAAAGGGAGCTCCAATTCCAAACCAGAATGCAGAAGCTAATAAGGCAAAGGACTTGAGGAGTAGAGGGTTGTGTTTGGTTCCTGTGTCATGCACACAACATGTTGGAAGTGAAAATGGAGCTGATTATTGGGCACCAGCATTTGGAAGTGGATTTTAA 987 0.4012 MMAGNPNWWSMHPSSLNIPPQYMLGSSSIPFNSLTENNAEVPPQSWSQLLFTGLPGEEERLGFNHFQPKNSENWDVQIMNPSSRVPFMDVIKHEVSQSENFYGQQGHHEEFHANSGSLASSWSHMVPVSSPTSHVTSLSSDNILDFTYNKIDHSKNQLPDQISECNSSTTGVNKKARVQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSSPYLDTAASKNMMRNQHSVHIERNSVFPEDPGQLLDDTGLKRKGAPIPNQNAEANKAKDLRSRGLCLVPVSCTQHVGSENGADYWAPAFGSGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0299 328 MobiDBLite consensus disorder prediction 158 186 - -
Mal4g0299 328 Gene3D - 188 254 IPR036638 GO:0046983
Mal4g0299 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 239 IPR036638 GO:0046983
Mal4g0299 328 CDD bHLH_AtbHLH_like 188 235 IPR045239 -
Mal4g0299 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
Mal4g0299 328 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 20 315 - -
Mal4g0299 328 MobiDBLite consensus disorder prediction 158 187 - -
Mal4g0299 328 PANTHER OS05G0228400 PROTEIN 20 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0299 Mal-Chr4 1854839 1858110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0299 1 269 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 38.279 3.79e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0299 - - gmx:100802121 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0299 4 1854839 1858110 Mal4g0299 4 1854839 1858110 ECH