Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0294 ATGGCTGAAGCTTCTAGGGTTCATCATCATTATCAACAATTTCTTCATTTTCCTCAAAATCAAATCATGATGATCAACAACAACTTCTATGATCATTTCAATCCAAATAATTCTAATGTTGCTTATGGTTCTGGTTGGTTTGTCCCAAGTTATCACTATGGATCTAGATCTCAAGTTTCTCCTGTTAGAAACCCTGAGACCTCTAATGACTTCAAGGATGTTCCGATTGTCCACATTGATTTCACCGACCTCTCTAAGGATGTTCCGATTCATGGGATCAGGATCCAAGAATACGATTTTTTCAAATCAGCAAAGAAATTGGAGGTAGGTTCATCTATATTAAATTGGGATAATAATAAGTTTAAAAATGGCAAGAAAGCTGGAGAAAAGTACCCGCTGAAGTCGAAAATATATTCGTGTAAATATTGTGAGAGGCAATTTTGTTCTTCGCAAGCTTTAGGAGGACACATAAAGGCTCATAATCGTGAGCGTCCAGCAAAGAAAAATATTTCATCGAAGTCAAAAATTCATCGATGTAAATATTGTGAGAGACATTTTAATTCTCCACAAGCTTTAGGAGGACACATAAAAGTTCATTATAAGCATGAACGTCAAGCAGAAAGCATGAATGCCATCAAGAAACAAGTCTCGCGTTCTGAACTTATGGAACTTGATTTGTCGCTCAAGCTATGA 693 0.3636 MAEASRVHHHYQQFLHFPQNQIMMINNNFYDHFNPNNSNVAYGSGWFVPSYHYGSRSQVSPVRNPETSNDFKDVPIVHIDFTDLSKDVPIHGIRIQEYDFFKSAKKLEVGSSILNWDNNKFKNGKKAGEKYPLKSKIYSCKYCERQFCSSQALGGHIKAHNRERPAKKNISSKSKIHRCKYCERHFNSPQALGGHIKVHYKHERQAESMNAIKKQVSRSELMELDLSLKL* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0294 230 PANTHER ZINC FINGER PROTEIN ZAT5 133 228 - -
Mal4g0294 230 PANTHER ZINC FINGER PROTEIN ZAT5 123 165 - -
Mal4g0294 230 SUPERFAMILY beta-beta-alpha zinc fingers 135 167 IPR036236 -
Mal4g0294 230 Gene3D Classic Zinc Finger 127 167 - -
Mal4g0294 230 Pfam C2H2-type zinc finger 138 162 - -
Mal4g0294 230 Pfam C2H2-type zinc finger 177 201 - -
Mal4g0294 230 ProSitePatterns Zinc finger C2H2 type domain signature. 179 199 IPR013087 -
Mal4g0294 230 SMART c2h2final6 177 199 IPR013087 -
Mal4g0294 230 SMART c2h2final6 138 160 IPR013087 -
Mal4g0294 230 Gene3D Classic Zinc Finger 168 227 - -
Mal4g0294 230 PANTHER ZINC FINGER PROTEIN ZAT5 133 228 - -
Mal4g0294 230 PANTHER ZINC FINGER PROTEIN ZAT5 123 165 - -
Mal4g0294 230 SUPERFAMILY beta-beta-alpha zinc fingers 174 203 IPR036236 -
Mal4g0294 230 ProSiteProfiles Zinc finger C2H2 type domain profile. 177 204 IPR013087 -
Mal4g0294 230 ProSiteProfiles Zinc finger C2H2 type domain profile. 138 165 IPR013087 -
Mal4g0294 230 ProSitePatterns Zinc finger C2H2 type domain signature. 140 160 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0294 134 222 C2H2 Transcription Factor Family AT1G49900 33.673 3.15e-12 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal4g0294 zf-C2H2_6 2.3e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0294 - - cam:101494832 84.3445