Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0291 ATGACACAACCATTATTTCTTCTCCTTAAAAAACACAACACTCTTCTTTCTTCACCACCAACGTTGTCAATGTGTGAAGACAACATGTCCAACAATCCTCCTTCAACTTCTCGTGCCAAAGATTTCTTTCCCTCTCCAGCTCTCTCTCTTAGCCTTGCGGGGATTTTTCGGCATGGTGGCGTGGCGGCGGAGGAGGGTGAAGGGGTTAGTATTAGTAACATGGAGGTGGAGGAAGGAGAGGAAGGGAGTACAGTAGGAGGTGATCAGCGAGTGGAGGAAATAAGCAGTGAATATTCAGGTCCAACAAGATCCAAATCAGAGGATGATTTTGAAGGAGAAGAAGAAGATGATAATAATAATAATAATAATGAAGGTGATGGAGATAATAAAAACAAGAAGAAAAGGAAGAAATATCACAGACACACTTCTGAACAGATCAGAATCATGGAAGCGCTTTTCAAAGAATCACCACATCCTGATGAAAAGCAGAGGCAACAACTTAGTAAGCAATTAGGACTTGCTCCAAGGCAAGTCAAGTTTTGGTTCCAAAATCGTCGAACCCAAATCAAGGCAATACAAGAGCGACATGAAAATTCATTGTTGAAATCAGAAATAGAGAAACTAAGGGAGAAAAATAAGAGCCTTAGAGATACCATAAACAAAGCTTGTTGCCCCAATTGTGGGGTACCAACCACAAACAGAGATGGTCCCATGCCAACTGAAGAACATCAACTTCGTATTGAAAATGCCAAACTCAAAGCTGAGGTAGAGAGGCTTAGAGCAGCTTTAGGAAAATATGCATCAGGGACAATGTCACCTTCATGTTCCACTAGCCAAGACCAAGAGAATATTAAAAGTTCTTTGGATTTTTATACTGGAATTTTTGGTCTTGATGAGTCAAGAATAATGGATGTTGTAAACCAAGCAATGGAGGAGCTTATAAAAATGGCTACATTAGGTGAACCATTGTGGCTACGTAGCTTAGAGACCGGTCGCGAAATACTTAACTATGATGAATATTTGAAGGAGTTTGCAGCTGAAAATTCAGACAGTGGAAGACCAAAGAGATCCATTGAAGCCTCAAGGGATACAGGGGTTGTTTTTGCAGATCTTCCTCGGATTGTCGAATGTTTTCTTGATGCTAATCAATGGAAGGAAATGTTTCCATGTTTAATATCTAAGGCAGCAACAGTTGACATTATATGCAAAGGAGAAGATTCTAACAAGAATGGTGCTGTGCAACTGATGTTTGCTGAGCTGCAAATGTTAACACCAATGGTTCCCACTAGAGAAGTGTATTTTGTCAGATACTGCAAACAATTGAGTGGTGAAAAATGGGCTATTGTTGATGTGTCCATAGACAAAGTAGAAGACAACATTGATAAGTCCCTTGTGAAGTGCAGAAAACTCCCATCTGGTTGCATTATTGAGGATAAGTCAAATGGTCATTGCAAAGTAACATGGGTGGAGCATTTGGAGTGCCAAAAGAGTGCAGTCTATTCGATGTATCGCACCATTGTCAATAGTGGCTTAGCCTTTGGGGCAAGGCATTGGATTGCGACCCTTCAACTTCAATGCGAACGTCTAGTTTTCTTCATGGCAACAAATGTTCCCATGAAGGATTCAACTGGTGTTGCCACATTGGCTGGGAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACTTGGAGTTTCTGCCATGCAATTAGTGCATCAAGCTTCCATACATGGACCAAAGTTACTAGTAAAACTGGTGAAGATATAAGAATTAGTTCAAGAAAGAATTTGAATGATCCTGGTGAACCTCTTGGATTGATACTTTGTGCAGTTTCTTCTGTTTGGTTGCCTATATCTCCTAATCTTCTGTTTGATTTCTTGAGGGACGAAGCTCGTCGAACTGAGTGGGATATAATGTCTAGTGGTGGGACAGTGCAATCCATTGCAAATTTAGCCAAAGGACAAGACAGAGGCAATGCAGTAACCATCCAAACAATTAAATCAAATGAAAACAATATGTGGATATTGCAAGATAGCTGCACAAATTCTTATGAGTCAATGGTGGTATATGCACCTGTGGATATTAATGGTATTCAGTCTGTAATGACCGGATGCGATTCGAGCAATCTTGCCATACTTCCCTCAGGATTTTCAATTGTTTCTGATGGTTTGGAGTCAAGGCAAATGGTAATTACTTCGAGGCGCGAAGAGAAAAATACAGAAGGAGGATCTTTGTTTACAATAGCATTCCAGATCCTTACAAATGCTTCTCCTACTGCCAAATTAACAATGGAGTCTGTGGATTCTGTCAACTCTCTTCTATCATGTACATTGAGACATATCAGAACAAGTCTAAATTGTGAAGATGGTTAG 2370 0.4021 MTQPLFLLLKKHNTLLSSPPTLSMCEDNMSNNPPSTSRAKDFFPSPALSLSLAGIFRHGGVAAEEGEGVSISNMEVEEGEEGSTVGGDQRVEEISSEYSGPTRSKSEDDFEGEEEDDNNNNNNEGDGDNKNKKKRKKYHRHTSEQIRIMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIEKLREKNKSLRDTINKACCPNCGVPTTNRDGPMPTEEHQLRIENAKLKAEVERLRAALGKYASGTMSPSCSTSQDQENIKSSLDFYTGIFGLDESRIMDVVNQAMEELIKMATLGEPLWLRSLETGREILNYDEYLKEFAAENSDSGRPKRSIEASRDTGVVFADLPRIVECFLDANQWKEMFPCLISKAATVDIICKGEDSNKNGAVQLMFAELQMLTPMVPTREVYFVRYCKQLSGEKWAIVDVSIDKVEDNIDKSLVKCRKLPSGCIIEDKSNGHCKVTWVEHLECQKSAVYSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCHAISASSFHTWTKVTSKTGEDIRISSRKNLNDPGEPLGLILCAVSSVWLPISPNLLFDFLRDEARRTEWDIMSSGGTVQSIANLAKGQDRGNAVTIQTIKSNENNMWILQDSCTNSYESMVVYAPVDINGIQSVMTGCDSSNLAILPSGFSIVSDGLESRQMVITSRREEKNTEGGSLFTIAFQILTNASPTAKLTMESVDSVNSLLSCTLRHIRTSLNCEDG* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0291 789 Coils Coil 242 262 - -
Mal4g0291 789 Pfam START domain 306 528 IPR002913 GO:0008289
Mal4g0291 789 MobiDBLite consensus disorder prediction 72 142 - -
Mal4g0291 789 Pfam Homeodomain 135 190 IPR001356 GO:0003677
Mal4g0291 789 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 42 786 IPR042160 -
Mal4g0291 789 SUPERFAMILY Bet v1-like 298 528 - -
Mal4g0291 789 SUPERFAMILY Homeodomain-like 125 193 IPR009057 -
Mal4g0291 789 CDD homeodomain 139 190 IPR001356 GO:0003677
Mal4g0291 789 ProSiteProfiles START domain profile. 295 531 IPR002913 GO:0008289
Mal4g0291 789 ProSiteProfiles 'Homeobox' domain profile. 132 192 IPR001356 GO:0003677
Mal4g0291 789 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN GLABRA 2 42 786 - -
Mal4g0291 789 CDD START_ArGLABRA2_like 300 527 - -
Mal4g0291 789 ProSitePatterns 'Homeobox' domain signature. 167 190 IPR017970 GO:0000981|GO:0006355
Mal4g0291 789 Gene3D - 119 204 - -
Mal4g0291 789 Coils Coil 191 218 - -
Mal4g0291 789 SMART HOX_1 134 196 IPR001356 GO:0003677
Mal4g0291 789 Gene3D - 344 524 IPR023393 -
Mal4g0291 789 SMART START_1 304 528 IPR002913 GO:0008289
Mal4g0291 789 SUPERFAMILY Bet v1-like 557 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0291 Mal-Chr4 1719459 1725990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0291 94 788 Homeobox Transcription Factor Family AT1G79840 65.812 0.0 935
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mal4g0291 START 3.7e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0291 K09338 - gmx:100808292 1240.71