Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0280 ATGGGTAAGGGTACCGGAAGTTTCGGTAAGAGAAGGAACAAGACTCACACACTCTGTGTGAGGTGCGGCCGCCGCAGTTTCCACCTTCAGAAGAGCCGTTGCTCTGCTTGTGCTTACCCTGCTGCTCGTGTCAGGAAATATAACTGGAGTGAAAAAGCAATCCGCAGAAAGACCACTGGAACTGGTAGGATGAGGTACCTGCGTAACGTTCCTCGCCGATTCAAGAGTGGTTTCAGAGAGGGAACTGAAGCTGCACCGAGGAAGAAGGGAGCTGCAACTGCTTGA 285 0.5228 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAYPAARVRKYNWSEKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTEAAPRKKGAATA* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0280 94 Hamap 50S ribosomal protein L37e [rpl37e]. 2 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Mal4g0280 94 ProSitePatterns Ribosomal protein L37e signature. 4 23 IPR018267 GO:0003735|GO:0005840|GO:0006412
Mal4g0280 94 PANTHER 60S RIBOSOMAL PROTEIN L37 1 93 - -
Mal4g0280 94 Pfam Ribosomal protein L37e 3 53 IPR001569 GO:0003735|GO:0005840|GO:0006412
Mal4g0280 94 Gene3D - 1 87 IPR011331 GO:0003735|GO:0005840|GO:0006412
Mal4g0280 94 PANTHER RIBOSOMAL PROTEIN L37 1 93 - -
Mal4g0280 94 SUPERFAMILY Zn-binding ribosomal proteins 1 55 IPR011332 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0280 Mal-Chr4 1617466 1618016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0280 1 94 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 87.234 8.70e-57 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0280 K02922 - han:110908531 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0280 4 1617466 1618016 Mal4g0280 4 1617466 1618016 ECH