Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0276 ATGGAATGTGAGGCTAGCTTGCGTATTAAAAGAAGTTGCGATGGAAAATGGATTGTTCACAACTTCATTAAAGACCACAATCATGAGCTATTTCCAGCATATGCACATTATTTTCCTTGCCATAGAGGAATCAATAAAGCTCAAAAGCATTGTATTGAAACTATGCAACATGTTGGAGTGAGAACAAGCAAAATTTATGCCACAATGGCCAAACAATATGGAGGATATGAAAACATTGGTTGTTTGGAGAAAGATATCAGAAATCATTTAGATAAAGGTCGGCGTTTGGAATTAGAATCAGGAGATGCAAATGCAATGTTGGAGTGTTTTATGCTCATGCAAGAAGAAAATCCAAGATTCTTTTATGCAATTGATTTGGATGATGAGGACCGCATACAAAATGTATTTTGGGTGGATGCAAAAGGTAGAGAAGACTATCAAGAATTTGGAGATGTGATTTCATTCGATACTACATATATCACAAATAAGTACAAAATGCCATTTGCTCCATTTATTGGTGTAAACAATCACTTTCAATCAAGACACTTTCACAGGTTGATGAAAACATGGCTTAGAGCAATAGGTGGAAAACCTCCAAATGTGCCTAAGAAGCTTAGTCATATAGTAAGTAAACACGAAGACTTCATGACATATCTCAACATATGCATTTATAAGTCTTGGTCAAAAAAACAATTTGAAGATAAATGGTATGAAATGGTGGAAAATTTTCAACTATTGGGAAATGAATGGATTTACTCTTTATATGAAGAACGTGAACATTGGGTTCCTGTTTACATGAATGATACATTTTTTGGTGGCATGTCAACAACTCAAAGATCAGAGAGCATTAATTCTTTTTTTGACAAATATGTATGTAAGAAAACTACATTAAAGGAATTTGTTGAAAAATATAAAATAGAGAAGAGGCAGAAAAGCAAGCTGATTTCAATACATGGCACAAGGCCTGGTCTAAGAACTCCATCACCTTTTGAGAAGCAAATGTCAATGATTTATACACATGAAGTCTTCAAGAAATTTCAATTTGAAGTTTTGGGATTATCTGGATGTCGTATTGTGAAAGAGCATAACGATAATCTAACTACCACTTTTACAAATTTTGACTTTCAGAAAAATGAAGAGTTTATTGTAGAGTGTGATGTCTCCAAAGAGGAAATATCTTGTCTATGTCGCTTGTTTGAGTATAATGGGTATCTTTGTAGACATTCATTAATGGCACTCCAAACTGTTGGTGTTTGTGCTGTCCCATCACACTATATATTGAGAAGATGGACCAAGGATATAAGAAGCAAGCATCATACAAGGAAAATGAAAGAAGACGTGTGTTCTAATACGGCCCTGAAGGAGAGATATTATAGTTTATATCAAAAGGCTATTGAATTTCTCGAAGAAGGATCACTAAGTTTTGAGAGTTACAATTTGGCTTATCATGCACTTGAAGAAGCCCGGAAACAATGTGCAACTATCAATCGGTCTTTGAAAATCGGCAAGGGAAAAGTTGGTCAGAGCAATTTACATGAGAAGGCATTGCGTGATCCTAAAAAAGCTAACACAAGAGGGGCTCCAAGAAGAATGAAGAGTGGGATCGAGAAAGGTCGTAAGAGAACAGCTAGTTGTAAAGTAAAAAAGCCTGCTATTGTTCAAAGAGAAGCAGTAAATACCTCAAATGTTCTCAATGATGAAGGAACAATTGCATCAACAAGAATGGAAAAAAATCATTAA 1740 0.35 MECEASLRIKRSCDGKWIVHNFIKDHNHELFPAYAHYFPCHRGINKAQKHCIETMQHVGVRTSKIYATMAKQYGGYENIGCLEKDIRNHLDKGRRLELESGDANAMLECFMLMQEENPRFFYAIDLDDEDRIQNVFWVDAKGREDYQEFGDVISFDTTYITNKYKMPFAPFIGVNNHFQSRHFHRLMKTWLRAIGGKPPNVPKKLSHIVSKHEDFMTYLNICIYKSWSKKQFEDKWYEMVENFQLLGNEWIYSLYEEREHWVPVYMNDTFFGGMSTTQRSESINSFFDKYVCKKTTLKEFVEKYKIEKRQKSKLISIHGTRPGLRTPSPFEKQMSMIYTHEVFKKFQFEVLGLSGCRIVKEHNDNLTTTFTNFDFQKNEEFIVECDVSKEEISCLCRLFEYNGYLCRHSLMALQTVGVCAVPSHYILRRWTKDIRSKHHTRKMKEDVCSNTALKERYYSLYQKAIEFLEEGSLSFESYNLAYHALEEARKQCATINRSLKIGKGKVGQSNLHEKALRDPKKANTRGAPRRMKSGIEKGRKRTASCKVKKPAIVQREAVNTSNVLNDEGTIASTRMEKNH* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0276 579 SMART 26again6 392 419 IPR006564 GO:0008270
Mal4g0276 579 Pfam FAR1 DNA-binding domain 2 32 IPR004330 -
Mal4g0276 579 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 201 514 IPR031052 GO:0006355
Mal4g0276 579 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 201 IPR031052 GO:0006355
Mal4g0276 579 MobiDBLite consensus disorder prediction 516 541 - -
Mal4g0276 579 ProSiteProfiles Zinc finger SWIM-type profile. 381 417 IPR007527 GO:0008270
Mal4g0276 579 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 2 201 - -
Mal4g0276 579 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 201 514 - -
Mal4g0276 579 Pfam SWIM zinc finger 385 416 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0276 Mal-Chr4 1557704 1561859 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g0276 SWIM 4.9e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0276 - - dzi:111309578 632.098