Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0261 ATGGATGGCATTGAAGATGATGCAATTGCAAGGTATCCCCCTAACCCTTATGGTGTTAGTCACCCTAACAATCAAGGTTATGGTTATCTCAAACACCCTTTGAAGAATTCTCCATATTCCCATCCAGTTGCAAATCAATCTGTCCAAGATTATAATGATGTCGATGATGAAGACCGGTTAGGAGGGAACAATGATGATGTTGTTGTTGATGATGATGATGATGTTGTTGTCGATGATGAGGTTGATGATGATGTTGATCAACATTCCCTAAAGCTGGCTGATGAAGGTGATGACACAGATGGGGACGGTGATGAAAATGACCGACAGAGTGAGGAATATGGTTATCCGAAACATCCTATGAGGAATTCTCCATATTCCCAGCCATTTGTGAATGAAGGTAACAATGGCGAGGATGAAGACGATGAAGAGCGATTAGTAGAGGAAGATGATGGTGATGATCAGAATAATAATGTTCAGTTTTCCCTGAAGCATGCTGATGAAGAAGATAACAATGATGGGGATGGGGATGGGGATGGGGATAGGGATGAAAATGATGATGTCAACGACGGTGATAATGACATTAAGCAGGAAAGTTATGCCATGATGAATGAAGATGAATTTGAGTGGCACCCAAAAAAGCAAAAGCTGAAGAGTTTGATGTCAACCTATGAATTTGCAGCTCGGGTGCCGGAACCATCAGCTGCAGCTACTTCAGCTTCCAAACGATCTTTTGGGGTTAGGAATTCCCTTACCGAGTGGACTGAGAAGGAGACATTCGTTCTTCTTGATGCGTGGGGTGATCGGTTTCTGCAACATGGAAGGAAGAGTCTTCGATCTGATGAATGGCAACAAGTTGCAGAGAAGGTATCAGAAGTTTCAAAAGTTGAAAGGACAGGTACTCAGTGTAGAAATCGTTTAGATACATTGAAGAAAAAATATAAAAAGGACAGGATTAAGTTTCAAGATATGGGTGGTGGAGATAGAAAATGGGTTTATTTTCAAAAGATGGATAAGCTAATGTCTTCTCCACCACAACAAGCAAGACTCTCTTGTGGTTCGAACTCAAGAGGGCGTGTTTTTATGAAGCCTAGAGTTTATGTAAATCATGCAAATGAGATGGATGATATGAAGGATAGTCCTCCTGAGAATACTGAATTCATCGGTAGAGAAGGTTTAGAACAACCGCCTCACACAAAGAAAAGAAGGACAGGAAGGGGAAGTGATGAGGCTTCTTCCTTCAAATTACTTGCTGATTCCATTCAGAATTTTGGTAAGATATATGAGAAGATTGAAAATAGTAAAAGGCAGCAGATGATGGAACTAGAAAAGATGAGGATGGATTTCCTCAATGATTTGGAAACACAAAAGAGACAGATTTTTGAAAGATTGCAGAGTGAGATTTTAAAACTCGAGCAAAGAGATGAGTAG 1428 0.4048 MDGIEDDAIARYPPNPYGVSHPNNQGYGYLKHPLKNSPYSHPVANQSVQDYNDVDDEDRLGGNNDDVVVDDDDDVVVDDEVDDDVDQHSLKLADEGDDTDGDGDENDRQSEEYGYPKHPMRNSPYSQPFVNEGNNGEDEDDEERLVEEDDGDDQNNNVQFSLKHADEEDNNDGDGDGDGDRDENDDVNDGDNDIKQESYAMMNEDEFEWHPKKQKLKSLMSTYEFAARVPEPSAAATSASKRSFGVRNSLTEWTEKETFVLLDAWGDRFLQHGRKSLRSDEWQQVAEKVSEVSKVERTGTQCRNRLDTLKKKYKKDRIKFQDMGGGDRKWVYFQKMDKLMSSPPQQARLSCGSNSRGRVFMKPRVYVNHANEMDDMKDSPPENTEFIGREGLEQPPHTKKRRTGRGSDEASSFKLLADSIQNFGKIYEKIENSKRQQMMELEKMRMDFLNDLETQKRQIFERLQSEILKLEQRDE* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0261 475 Gene3D - 253 315 - -
Mal4g0261 475 Pfam Myb/SANT-like DNA-binding domain 252 339 IPR044822 -
Mal4g0261 475 MobiDBLite consensus disorder prediction 67 83 - -
Mal4g0261 475 MobiDBLite consensus disorder prediction 134 154 - -
Mal4g0261 475 ProSiteProfiles Myb-like domain profile. 253 310 IPR001005 -
Mal4g0261 475 MobiDBLite consensus disorder prediction 52 66 - -
Mal4g0261 475 Coils Coil 427 458 - -
Mal4g0261 475 MobiDBLite consensus disorder prediction 1 206 - -
Mal4g0261 475 MobiDBLite consensus disorder prediction 392 408 - -
Mal4g0261 475 PANTHER OS01G0718900 PROTEIN 134 474 - -
Mal4g0261 475 MobiDBLite consensus disorder prediction 171 190 - -
Mal4g0261 475 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 134 474 IPR044823 -
Mal4g0261 475 MobiDBLite consensus disorder prediction 372 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0261 Mal-Chr4 1445872 1447299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0261 392 473 Trihelix Transcription Factor Family AT3G14180 39.080 7.14e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal4g0261 Myb_DNA-bind_4 5e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0261 - - mtr:MTR_2g102227 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0261 4 1445872 1447299 Mal4g0261 4 1445872 1447299 ECH