Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0251 ATGGCAAAGGGTTGCTCCAGTAACAACTATGAAGCGGCTAGAAAACAAAGACTTGAGGAAAACAAAAAGAGGTTTGAGGATTTAGGAATTTCAACAATATCCAAAAAATTGACTGAAATCGCAAGTCCAGCAAAGAAGTCCACGAATCGTCATTTCAGACCAAAATCAAAGACTAATGCTGTTGTGGAACCTAGGCGCTCTTCTCGTGCAAGAAACCCAGTTCCTTCGTATCGTGAAGAGTTTGACATAGACCTTCCACAGTTGCGGAAGAGGTCAAGATCACGTTCATCATCATGGGGAAGTTACGCTTACGCTGCGAGGCCACTGGATGAAATCAAAGTTGCTACAAAGCAAGAAAGAGATCGTGCTTCGGATGCTGCAGAGGCACTCCAAATCAATTTGCAAACTTCGAATCCATCATTTGTCAAGTCAATGGTCCGGTCTCATGTTTATAGCTGTTTTTGGTTGGGTCTTCCTAGTAGATTTTGTGAGGACCATCTTCCAAAAATAAAAAAATATAACATGGTTTTAGAAGATGAGAAGGGCTCAGAATATGATGCTAGTTACCTTGGTGACAGAGTTGGGCTTAGTGGTGGCTGGAGAGCATTTGCATTGGAACATAAATTGGATGATGGCGATGCACTAGTTTTTGAATTAGTTGAACCAGCAAGATTTAAGATTTATATTGTCAGAGCATTTGCAAATATAGATGAAGAAGAAGACGAGGAAGAAGAAAACAATACTTTGGTGGAAGAAGAAAATATGCACACATCCAAAGCAATGAAAGAATCTGAAACTGTGAAACCAAAGGAAGCTACAAGGAAAACTAGATCTTCGCAGAACAAAATGCAAAAACCAAAGGAAGCTACAAAGAAAACTAGATCTTCTCAGAAAAAAATGCAAAAGATATCTGAAGTATCTACTGCAATTGAGCCAAAAGAGGAAGCACACCTCGAAACTGTGAAACCAGAGGCAGCTACAAAGTTGCCAAACAAGAGAAGGAAGTCAAAAGAAGGTGATGTGTGTGAAATTGGTGACTCGGCCAATGCTGAGAAGATTCTTTTGGAAGAAAATGTTGTTAAAACAACGGAGACTGACCTAGGCAAGAAGAAAGAACTGGTTCAGGATGATGATAATGAGTTGAAGAAAGTTAAGCCAGATGAAAAAGCTAGCAAACCTGCTGCAGAAAAACCTCGGAAAAAACGAGCTCCAAAGTTTTTCAGAAAGAGAGATTAG 1236 0.3989 MAKGCSSNNYEAARKQRLEENKKRFEDLGISTISKKLTEIASPAKKSTNRHFRPKSKTNAVVEPRRSSRARNPVPSYREEFDIDLPQLRKRSRSRSSSWGSYAYAARPLDEIKVATKQERDRASDAAEALQINLQTSNPSFVKSMVRSHVYSCFWLGLPSRFCEDHLPKIKKYNMVLEDEKGSEYDASYLGDRVGLSGGWRAFALEHKLDDGDALVFELVEPARFKIYIVRAFANIDEEEDEEEENNTLVEEENMHTSKAMKESETVKPKEATRKTRSSQNKMQKPKEATKKTRSSQKKMQKISEVSTAIEPKEEAHLETVKPEAATKLPNKRRKSKEGDVCEIGDSANAEKILLEENVVKTTETDLGKKKELVQDDDNELKKVKPDEKASKPAAEKPRKKRAPKFFRKRD* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0251 411 MobiDBLite consensus disorder prediction 240 349 - -
Mal4g0251 411 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS05G0481400 4 239 - -
Mal4g0251 411 SUPERFAMILY DNA-binding pseudobarrel domain 134 231 IPR015300 -
Mal4g0251 411 Pfam B3 DNA binding domain 141 230 IPR003340 GO:0003677
Mal4g0251 411 MobiDBLite consensus disorder prediction 41 73 - -
Mal4g0251 411 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 4 239 IPR044837 -
Mal4g0251 411 MobiDBLite consensus disorder prediction 308 345 - -
Mal4g0251 411 ProSiteProfiles B3 DNA-binding domain profile. 141 233 IPR003340 GO:0003677
Mal4g0251 411 MobiDBLite consensus disorder prediction 362 397 - -
Mal4g0251 411 Gene3D - 114 234 IPR015300 -
Mal4g0251 411 MobiDBLite consensus disorder prediction 362 411 - -
Mal4g0251 411 CDD B3_DNA 139 231 IPR003340 GO:0003677
Mal4g0251 411 Coils Coil 233 253 - -
Mal4g0251 411 MobiDBLite consensus disorder prediction 250 299 - -
Mal4g0251 411 SMART B3_2 141 233 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0251 Mal-Chr4 1284510 1288379 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0251 10 232 B3 DNA Binding Superfamily AT5G58280 49.801 2.12e-67 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal4g0251 B3 8.9e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0251 - - gmx:100786265 392.504