Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0247 ATGAATATTCATGAAACTGAGCTCACCCTTGGTCTTCCTGGTAGTAGCACCAAAACTGGAACAAAACGTGGCTTCTCCAACACTCATCTTGATCTTCATCTTGCCACCTCAACCTCTAGTACTTCTCATCATCATAATTCACCAAATTATAATACCACTAAATTCCCAAAACTATCAAAGGAACATGTGGTGGGATGGCCACCGGTGAGGGCAAGTAGGAAAAATATTGCAATGAAAAGTAATAGTTGCAAGTACGTGAAAGTTGCGGTGGATGGAGCTCCATATCTAAGAAAAGTTGATCTTCAAATTTATGACGGTTATGACCATCTTCTTAGGGCATTGGATACCATGTTTGCTACTAATTTGTTCACTACTCGTTATAATGATTTGATGAATGAGAAGAAATTTATGGATTATAGAAAAAATGGGATTAATGAATACATGCCTACCTACGAGGACAAAGATGGTGACTGGATGTTACTTGGGGATGTACCATGGAAAATGTTTGTTGAATCATGCAAGAGGATAAGGCTTATGATTAGCTCGGAGGACAATATTGACTTTGGTTCGAGGACTACTACTTCCAAGAGTTCCAGATATACGGCCTCCAGTGAGAAGAGTAATTAG 627 0.3907 MNIHETELTLGLPGSSTKTGTKRGFSNTHLDLHLATSTSSTSHHHNSPNYNTTKFPKLSKEHVVGWPPVRASRKNIAMKSNSCKYVKVAVDGAPYLRKVDLQIYDGYDHLLRALDTMFATNLFTTRYNDLMNEKKFMDYRKNGINEYMPTYEDKDGDWMLLGDVPWKMFVESCKRIRLMISSEDNIDFGSRTTTSKSSRYTASSEKSN* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0247 208 Gene3D - 78 190 - -
Mal4g0247 208 PANTHER AUXIN-RESPONSIVE PROTEIN IAA15 1 184 - -
Mal4g0247 208 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 184 IPR003311 GO:0005634|GO:0006355
Mal4g0247 208 MobiDBLite consensus disorder prediction 9 23 - -
Mal4g0247 208 MobiDBLite consensus disorder prediction 1 23 - -
Mal4g0247 208 Pfam AUX/IAA family 18 184 IPR033389 -
Mal4g0247 208 ProSiteProfiles PB1 domain profile. 83 185 IPR000270 GO:0005515
Mal4g0247 208 SUPERFAMILY CAD & PB1 domains 76 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0247 Mal-Chr4 1250485 1252107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0247 45 176 B3 DNA Binding Superfamily AT4G23980 27.612 2.49e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mal4g0247 AUX_IAA 4e-48 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0247 K14484 - gmx:100815098 209.534