Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0244 ATGAAGAAAGAAAAGAGTGTCAGTTCAAAAGCTGGAGAGGTCCCGGTTCGATTAACTCGTGCACGAGCTGCTGCTTTAAGTGCAACTGGAGAGTTGCCACCAAAACCATTGAATGAGGTAGTACAAGAAAATCAGAAGCATCCGTTAGGAGTGAATTTGGAAAAAGCAGTTTCAGATAATACACGTCCTCCGCGTCAAAAGAGGGCAGTTCTTGAGGATGTCACTAACATTTGCCAGGCTAAGAAAATAAAGCTGACTAAGCCGGATCAACTCAATGTTTCAACCAAGGTTCCGTCGGTTTCTTCAGAGTTTCCGCAGTTTCAAACTGACTCAAAAGATGAGAGTTTGCAAGAAATAGGGCTTAGATCAGAAGAAGCTATGTGCTCAGTTAATTTGGAAGACAATGCACCTTTAAATCTGATTGGTAGCCAAACATCTGGAATATCTGCTCAACCTTTGATTTCTCAAGATCAAGCAGGTTTGCAAACTGATGCAGCCGAGACAGGTAGTGATTCTGAACTTCTGAATGCGCCAAAGGATCCGGATATTCCTAATATAGATGCTGATATTGAAGATCTTCAACTATGCAGCTTCTATGCCGCTGATATATTTGACAACTTGCGTATTGCTGAGCTGTCGAGAAGGCCTCATCCTAACTTCATGGAAACGGTACAGCGAGATTTAACTCCAGGCATGCGTGGGATACTGATTGATTGGCTTGTAGAGGTTTCTGAGGAATTCAATTTGCAAGCAAACACTCTTTACCTCACTGTATATCTCATAGATTGGTTTCTCTCCAAAACTTACATTGAAAGACAGAGACTTCAGCTGCTAGGCATCACTTGCATGCTAATTGCCTCGAAGTACGAAGAAATTCATGGCCCGCATGTTGAAGATTTCTGCGTCATCACGGACAACACATACACAAGAGAGGAGGTACTAAACATGGAGATTCAAGTATTAAAGTCATCTGCATATCAACTTTTTGCTCCCACAGCAAAACATTTTCTCAGGAGGTTTCTTCGAGCAGCACAAGCTTCATACCAGATACCTAGCATTGAGTTGGAGTACTTGGCAAATTATCTGGCTGAATTAACACTGACAAACTATGGTTTCTTAAATTTTGTTCCTTCTATGATTGCTGCATCTGCCGTGTTTCTCGCAAGATGGACATTGGATCAGTCAAGGCACCCATGGAATCCAACTCTCGAACACTATGCCTCTTACAAAGCATCAGATTTGAAGGCCACAGTTCTTGCATTACAAGGTCTGCAGCTGAATAGCGATGATTGCCCTTTAACCGCGACCCGTACAAAATACCGACAAGACAAGTTCAATTCTGTAGCAGTTTTGTCGTCACCAAAACTACTTGAAACAATGTTTTGA 1386 0.4214 MKKEKSVSSKAGEVPVRLTRARAAALSATGELPPKPLNEVVQENQKHPLGVNLEKAVSDNTRPPRQKRAVLEDVTNICQAKKIKLTKPDQLNVSTKVPSVSSEFPQFQTDSKDESLQEIGLRSEEAMCSVNLEDNAPLNLIGSQTSGISAQPLISQDQAGLQTDAAETGSDSELLNAPKDPDIPNIDADIEDLQLCSFYAADIFDNLRIAELSRRPHPNFMETVQRDLTPGMRGILIDWLVEVSEEFNLQANTLYLTVYLIDWFLSKTYIERQRLQLLGITCMLIASKYEEIHGPHVEDFCVITDNTYTREEVLNMEIQVLKSSAYQLFAPTAKHFLRRFLRAAQASYQIPSIELEYLANYLAELTLTNYGFLNFVPSMIAASAVFLARWTLDQSRHPWNPTLEHYASYKASDLKATVLALQGLQLNSDDCPLTATRTKYRQDKFNSVAVLSSPKLLETMF* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0244 461 SUPERFAMILY Cyclin-like 331 456 IPR036915 -
Mal4g0244 461 MobiDBLite consensus disorder prediction 157 181 - -
Mal4g0244 461 PANTHER CYCLINS 48 461 IPR039361 -
Mal4g0244 461 PANTHER CYCLIN-A2-4 48 461 - -
Mal4g0244 461 Pfam Cyclin, C-terminal domain 331 453 IPR004367 -
Mal4g0244 461 CDD CYCLIN 232 321 IPR013763 -
Mal4g0244 461 PIRSF Cyclin_A_B_D_E 3 460 IPR039361 -
Mal4g0244 461 SUPERFAMILY Cyclin-like 191 323 IPR036915 -
Mal4g0244 461 Pfam Cyclin, N-terminal domain 202 323 IPR006671 -
Mal4g0244 461 Gene3D - 202 450 - -
Mal4g0244 461 CDD CYCLIN 331 421 IPR013763 -
Mal4g0244 461 Gene3D - 216 329 - -
Mal4g0244 461 SMART cyclin_7 335 423 IPR013763 -
Mal4g0244 461 SMART cyclin_7 238 322 IPR013763 -
Mal4g0244 461 SMART Cyclin_C_2 331 454 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0244 Mal-Chr4 1220881 1223936 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0244 1 461 Core Cell Cycle Gene Families AT1G15570 49.791 4.01e-151 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0244 K06627 - mtr:MTR_2g102550 673.7