Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0136 ATGCCTACATTAAATCAATTGATTCGTCATGGTAGAGAAAAAAAACGGCGCACGGACCGTACTCGAGCTTCGGATCAATGTCCCCAGAAGCTAGGAGTACGCCAGCGTGTTTTTAACAGAACACCGAAAAAACCAAATTCAGCTCGACGTAAGATAGCCAAAGTACAATTGATCAGCAATAAACATGATATATTTGCTCACATTCCGGGCGAAGGTCATAATTCGCAGGATCATTCTACGGTCTTAATAAGAGGAGGTAGAGTTAAAGATTTGCCAGGTGTGAAATCCCATTGTATTCGAGGAGTCAAGGATTTGTTGGGAATTCCGGATCGAAGAAGAGGCAGATCAAAATATGGTGCAAAAAAACCCAAATCGATATGA 381 0.4173 MPTLNQLIRHGREKKRRTDRTRASDQCPQKLGVRQRVFNRTPKKPNSARRKIAKVQLISNKHDIFAHIPGEGHNSQDHSTVLIRGGRVKDLPGVKSHCIRGVKDLLGIPDRRRGRSKYGAKKPKSI* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0136 126 PIRSF RPS12p_RPS12a_RPS23e_RPS12o 1 125 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal4g0136 126 Gene3D - 1 126 IPR012340 -
Mal4g0136 126 PRINTS Ribosomal protein S12 signature 42 57 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal4g0136 126 PRINTS Ribosomal protein S12 signature 27 42 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal4g0136 126 PRINTS Ribosomal protein S12 signature 111 123 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal4g0136 126 PRINTS Ribosomal protein S12 signature 78 95 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal4g0136 126 PRINTS Ribosomal protein S12 signature 59 78 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal4g0136 126 PRINTS Ribosomal protein S12 signature 95 111 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal4g0136 126 Pfam Ribosomal protein S12/S23 12 124 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal4g0136 126 ProSitePatterns Ribosomal protein S12 signature. 43 50 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal4g0136 126 CDD Ribosomal_S12 3 111 IPR005679 GO:0003735|GO:0006412|GO:0015935
Mal4g0136 126 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 1 124 IPR006032 GO:0003735|GO:0005840|GO:0006412
Mal4g0136 126 TIGRFAM rpsL_bact: ribosomal protein uS12 1 124 IPR005679 GO:0003735|GO:0006412|GO:0015935
Mal4g0136 126 MobiDBLite consensus disorder prediction 1 27 - -
Mal4g0136 126 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN, SMALL 1 124 - -
Mal4g0136 126 SUPERFAMILY Nucleic acid-binding proteins 2 124 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0136 Mal-Chr4 556283 556663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0136 43 100 Cytoplasmic Ribosomal Protein Gene Family AT5G02960 43.077 1.08e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0136 K02950 - zju:27215255 231.106