Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5152 ATGCTACATGAAGAACATAAGCCAGATGAAGGAACAGAAAGACCTAGGATAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGTTTGGGAAGAGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAATATAGAAATAACACTTGGAAAGGGTGGACAATTAGCTCGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCAACATTAAAATTACCTTCTGGAGAGGTCCGTTTGATATCCAAAAACTGCTCAGCAACAGTCGGACAAGTCGGGAATGTTGGAGTAAACCAGAAAAAGATTATATAA 351 0.4103 MLHEEHKPDEGTERPRIKPYALEEACTVWEEVLIDQKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKKII* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5152 116 PANTHER - 33 114 - -
Mal3g5152 116 SUPERFAMILY Translation proteins SH3-like domain 44 115 IPR008991 -
Mal3g5152 116 Pfam Ribosomal Proteins L2, C-terminal domain 44 115 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mal3g5152 116 SMART Ribosomal_L2_C_2 44 116 IPR022669 GO:0003735|GO:0005840|GO:0006412
Mal3g5152 116 Gene3D - 22 107 IPR014722 -
Mal3g5152 116 PANTHER RIBOSOMAL PROTEIN L2 33 114 IPR002171 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5152 Mal-Chr3 131652218 131653043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5152 44 116 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 38.667 5.74e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5152 K02886 - csin:114298497 178.333