Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5131 ATGGAAGAGACTACTAAGAGAAAACGTGTTAGTCTGATTAGTGAATTAAGCCAAGGAAAGGAGCTAGCAAAGCAGCTAAGTAACCATATGATTTTATCATCCAATCAAACCAATGAATTCTTGATTAACAAAATAATTTCAACCTACCAGAAAGCACTAACTATGTTGAATGTTAATTCTTCTTTTACAAACGAGAGTCCCAGAAGTGAGGTCATCATAGACCATGAGTTTAAGCAAAAAGCTCTCTTCAAGAAAAGAAAGAGCATGCCCAAATGGAAAGAGCAAGTGAAGATTTGCAGAAACACAGGATTATTTAAAGGGTCTTTGGATGATGAATATAGCTGGAGAAAATATGGTCAAAAAGAAATTCTTGGAGCTAAGTTTTCAAGAGGATATTACAGATGCACACATAGAAATGGACAAGGGTGCCTAGCAACAAAGCAAGTTCAAAGGTCAGATGAAGATCCAACAATAATTGAGGTTACTTACAGAGGAAGACACACATGCACTCATTCTCAAGCTAAGCCTTTAAAAAAGGAGTTTCCCTCAAAGTTAAAGGTAAAGGGTTTGGAGAAAAATAACCTCCACAATGATAAAAAGAATCAACCACAAATCCAAGAGGCTAGTTTCACTTCCAAAGCAGAACTTGATGTCAAAAAAAAGGACTTAGAAGAAACCAAAGAGGATATCTTCCCTTGGTTTTGTTTTCCTTCTCCATCAATTGGACCAGAAAATGAGATAATGATGGAATCAAACTTTTTTGGTTTGTCTGAATACCAATTGGGTTTCACTGGATTATACCAAAATGGACAAACTTCAGAATCTGATATCACTGAGACAGTTTCAGCACCAACTTCAGTCACCAATTCACCAATCCTTGATATGGATATCTTGCTACATAGAGGGAATTTTGACACTGATTTCCCTTTCAACACCCCTGAATATTTCTCTTCATAA 957 0.3626 MEETTKRKRVSLISELSQGKELAKQLSNHMILSSNQTNEFLINKIISTYQKALTMLNVNSSFTNESPRSEVIIDHEFKQKALFKKRKSMPKWKEQVKICRNTGLFKGSLDDEYSWRKYGQKEILGAKFSRGYYRCTHRNGQGCLATKQVQRSDEDPTIIEVTYRGRHTCTHSQAKPLKKEFPSKLKVKGLEKNNLHNDKKNQPQIQEASFTSKAELDVKKKDLEETKEDIFPWFCFPSPSIGPENEIMMESNFFGLSEYQLGFTGLYQNGQTSESDITETVSAPTSVTNSPILDMDILLHRGNFDTDFPFNTPEYFSS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5131 318 SMART WRKY_cls 109 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g5131 318 ProSiteProfiles WRKY domain profile. 109 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g5131 318 Gene3D WRKY domain 97 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g5131 318 PANTHER WRKY TRANSCRIPTION FACTOR 46-RELATED 1 315 - -
Mal3g5131 318 SUPERFAMILY WRKY DNA-binding domain 108 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g5131 318 Pfam WRKY DNA -binding domain 110 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g5131 318 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 315 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5131 Mal-Chr3 131389462 131391338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5131 3 309 WRKY Transcription Factor Family AT4G11070 37.380 1.21e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal3g5131 WRKY 6.2e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g5131 3 131389462 131391338 Mal3g5131 3 131389462 131391338 ECH
Mal5g1172 5 20961224 20963533 Mal3g5131 3 131389462 131391338 ECH
Mal7g5021 7 119352163 119353483 Mal3g5131 3 131389462 131391338 ECH
Mal3g5131 3 131389462 131391338 Mal2g1830 2 22062337 22063843 PCT