Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5117 ATGTCATCTTCTTGTTCTTCGATTCTTGTAATCCAAATTCCAACAACAATGGATTCTGTTATGACGCAGAAGATGGTTTTCAAACCTCTGAATCTCAATTTTCACAGAGGCATCCAACAGCAGCTGAAGCTGAACCATCGCGTTTTGCCATTGCGGTGCTCAAACTCAACTCTTTCTTCTTCTTCCAGATCGGAGAATGATGATGGTGCTGTTGTTCTCCATGTTCGGGGAATGATGTGTGAGGGATGTGCATCTAGCGTCAAAAAAATTCTTGAAACTCAACCACAAGTGTTATCTGCTACTGTGAATCTAGCATCAGAGACAGCACTAGTTTCCCTTTCCTCAGACAAAACTTCAACAAATTGGCAAAAACAGTTAGGAGAGACACTTGCACACCACTTAACAACATGTGGTTTTACTTCTACCCTTAGAGGTAAGAATCAAGATGACCTCTCTCTCCCCCAACAAAACAAATGA 477 0.4151 MSSSCSSILVIQIPTTMDSVMTQKMVFKPLNLNFHRGIQQQLKLNHRVLPLRCSNSTLSSSSRSENDDGAVVLHVRGMMCEGCASSVKKILETQPQVLSATVNLASETALVSLSSDKTSTNWQKQLGETLAHHLTTCGFTSTLRGKNQDDLSLPQQNK* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5117 158 PANTHER COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC 53 142 - -
Mal3g5117 158 PANTHER ATP7, ISOFORM B 53 142 - -
Mal3g5117 158 CDD HMA 72 142 IPR006121 GO:0046872
Mal3g5117 158 ProSitePatterns Heavy-metal-associated domain. 75 104 IPR017969 GO:0046872
Mal3g5117 158 SUPERFAMILY HMA, heavy metal-associated domain 70 121 IPR036163 GO:0046872
Mal3g5117 158 Pfam Heavy-metal-associated domain 73 118 IPR006121 GO:0046872
Mal3g5117 158 ProSiteProfiles Heavy-metal-associated domain profile. 70 143 IPR006121 GO:0046872
Mal3g5117 158 Gene3D - 70 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5117 Mal-Chr3 131293902 131294592 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5117 71 144 Primary Pumps ATPases AT4G33520 61.333 4.22e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5117 - K17686 mtr:MTR_7g116990 201.06