LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal3g5092	ATGGGAGAAGGTGGTTTTGGCAGAGTTTACAAAGGAACAATTCCTGCAACAGGGCAGGTGGTAGCAGTGAAGCAACTTGACCGAAATGGGATTCAAGGAAGTAAAGAATTTCTTGTTGAGGTTTTGATGTTGAGTCTCTTAAACCATGAAAATCTTGTCAAACTCACTGGTTATTGTGCTGATGGTGATCAACGTCTTTTGGTGTATGAATTCATGCCAGGGGGATCTGTAGAAACACATTTTTTTGGTTTTGGTTCAGAGCGAAGTCCTGATCAAGTTTCATTAGATTGGTATAGCAGAATGAAAATAGCATCTAGTACTGCAAAAGGATTGTGGTACTTGCACGACAAGGCAAACCCTTCAATTATATATCGGGATTTGAAATCGTCGAACATTTTGCTTGATAATGATCTTCATGCAAAACTATCCGATTATGGACTTGCTAAACTTGCTGGTAAAGATAAGACGAACATTGTTCCTACAAGAGTCATGGGTACTTATGGTTATAGTGCACCAGAGTATGTAAGAACAGGTAACCTCACCTTGAAATCAGATGTGTACAGTTTTGGAGTTGTCTTGCTAGAGCTTGTAACTGGAAGACGAGCTATCGATACCACAAGATCTCACGACGAGCAAAATCTAGTTTCATGGGCACAACCAATATTTAGAGATCCAAAAAGATATGGAGATTTGGCAGATCCAAATCTGAATAAACATTACCCGGAAAAGGATCTGAATCAAGTTGTTGCAATTGCAGCCATGTGCTTACAGGAGGAATCAGCGGCGCGTCCTTTGATGAGTGATGTTGTAACTGCTCTAAGTTTTCTTTCAACTTCTCCTCCTCCAGGAGATGTTCCTACCCCTCTTCCACCTCCCAACTCCACCTCCCAGAAGAGTGTTGCCACTGCCGGTGAAAGTGAGAGCGAAAATGAGGAGAGCCATAGTTCTGATGAAGAGCATTCTGTTCATGAGGATAATCATGCTGTTGCAGCAGCTAGTACAAAATACCAAGAATGTGATGATGTATCAGACACTGAATGTGACTATTACGAGAATGAAAACCAACCTGATTATAGTCCACAAGATTCTAAAAAAACAAAGGAGTTCTACTCCAAATCAAGCCGCAAAAGCAGCACCAAATCAAGGAAGGGAACCGTTTCTTCAGTCCGAAGAAACAACTCAAGTTCAGATTCAGAAAATGGTCACAAAAGCAGTAGGAGAAAACATGGTGTGGATGGAAGTTTAACTCAAAAAAGCAGCAAAAAATCTGCTGCAAGAGATTTAAGCCAAAAGAGCAGTAAGAAATCTCAAGTAACAAAGGATTTAAGCCAAAAGAGCAGTAAAAAATCTTCTGCAAGAGTTGTAAGTCAATCAAATCATAGCAGCAGCAATGAGGAGTCACAAGATGAAGGTGTTCTTCTCAAGCGTGGTGACAGTAGGCCATCACATGATGGAAATGGATATTCTTTTGGCTTAATGAGCAGTGATAGCGGGGAAGGATCACGTTTAGATGTTCATCATTTTGATCGCATGAGCATGGGGCCATCTGAGGAGGGAAGTTTTCACCGGTTTGAACATTCCAGCAGCAGGGGATCAGATGAAGGAATTGTTCATTCTCGATAA	1623	0.4116	MGEGGFGRVYKGTIPATGQVVAVKQLDRNGIQGSKEFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYEFMPGGSVETHFFGFGSERSPDQVSLDWYSRMKIASSTAKGLWYLHDKANPSIIYRDLKSSNILLDNDLHAKLSDYGLAKLAGKDKTNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELVTGRRAIDTTRSHDEQNLVSWAQPIFRDPKRYGDLADPNLNKHYPEKDLNQVVAIAAMCLQEESAARPLMSDVVTALSFLSTSPPPGDVPTPLPPPNSTSQKSVATAGESESENEESHSSDEEHSVHEDNHAVAAASTKYQECDDVSDTECDYYENENQPDYSPQDSKKTKEFYSKSSRKSSTKSRKGTVSSVRRNNSSSDSENGHKSSRRKHGVDGSLTQKSSKKSAARDLSQKSSKKSQVTKDLSQKSSKKSSARVVSQSNHSSSNEESQDEGVLLKRGDSRPSHDGNGYSFGLMSSDSGEGSRLDVHHFDRMSMGPSEEGSFHRFEHSSSRGSDEGIVHSR*	541

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal3g5092	540	MobiDBLite	consensus disorder prediction	380	395	-	-
	Mal3g5092	540	SMART	serkin_6	2	276	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal3g5092	540	MobiDBLite	consensus disorder prediction	305	326	-	-
	Mal3g5092	540	MobiDBLite	consensus disorder prediction	358	375	-	-
	Mal3g5092	540	MobiDBLite	consensus disorder prediction	519	540	-	-
	Mal3g5092	540	ProSiteProfiles	Protein kinase domain profile.	1	276	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal3g5092	540	MobiDBLite	consensus disorder prediction	280	326	-	-
	Mal3g5092	540	Pfam	Protein kinase domain	1	270	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mal3g5092	540	PANTHER	OS07G0668900 PROTEIN	1	505	-	-
	Mal3g5092	540	PANTHER	RECEPTOR KINASE-LIKE PROTEIN	1	505	-	-
	Mal3g5092	540	CDD	STKc_IRAK	1	273	-	-
	Mal3g5092	540	MobiDBLite	consensus disorder prediction	430	468	-	-
	Mal3g5092	540	Gene3D	Phosphorylase Kinase; domain 1	1	72	-	-
	Mal3g5092	540	SUPERFAMILY	Protein kinase-like (PK-like)	2	308	IPR011009	-
	Mal3g5092	540	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	122	134	IPR008271	GO:0004672\|GO:0006468
	Mal3g5092	540	MobiDBLite	consensus disorder prediction	347	540	-	-
	Mal3g5092	540	Gene3D	Transferase(Phosphotransferase) domain 1	73	280	-	-
	Mal3g5092	540	MobiDBLite	consensus disorder prediction	396	415	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal3g5092	Mal-Chr3	131072766	131075214	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal3g5092	1	328	Glycoside Hydrolase	AT3G07070	61.515	5.09e-141	412

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VIIa-1	Mal3g5092		Pkinase	2.7e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal3g5092	-		-	gmx:100807682	610.142