Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5077 ATGTTGAAGTTCTCTCGCATGCTTCCTTCATCTTCCAGTTCCAGGAATCAGCTATTGGAAGTTCTTTCCGCTAGGGATTTCTCTACTTCCACTAATAACAACTATTCTGCTGCTAAAGGATATACTTCAGATCGTATATTTGCTCCTTATTCTGTTTACAAGGGCAAAGCTGCATTCTCACTCAGTCCTTGTCTTCCTACTTTCACTAAACTCGACTCTGGAGCTCTTGTGGTTGATCGTCGCGGTTCCATAATGATGAGTTTCATGCCTGCTATTGGGGACCGCAAATATGACTGGGAGAAGAGACAAAGATTTGCCCTATCAGCTACTGAAGTCGGTTCTTTGATAGCCATTGGCCCCCAGGATTCATGTGAATTCTTTCATGACCCCTCAATGAAATCAAGTAATGCTGGTCAAGTAAGGAAGAGTTTGTCAATTAAGCCTCATAGCAATGGCTACTTTGTCTCTCTAACTGTTGTTAACACCGTGTTAAATACCAAAGACAATTTAAGTGTTCCTGTTACAACTGCTGAGTTTGCTGTGATGAAGACAGCTTGCAGTTTTGCATTGCCACACATTATGGGTTGGGATCGTCTAACTAATCAGCAGTCCAGTGGGACAGTCAGCTTTCAACCGAAGATGAACTCGCAAAGTTTAGACTTGGAGTGGGAAAAGTGA 678 0.4263 MLKFSRMLPSSSSSRNQLLEVLSARDFSTSTNNNYSAAKGYTSDRIFAPYSVYKGKAAFSLSPCLPTFTKLDSGALVVDRRGSIMMSFMPAIGDRKYDWEKRQRFALSATEVGSLIAIGPQDSCEFFHDPSMKSSNAGQVRKSLSIKPHSNGYFVSLTVVNTVLNTKDNLSVPVTTAEFAVMKTACSFALPHIMGWDRLTNQQSSGTVSFQPKMNSQSLDLEWEK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5077 225 Gene3D Transcriptional Coactivator Pc4; Chain A 36 207 IPR009044 GO:0003677|GO:0006355
Mal3g5077 225 Pfam Whirly transcription factor 52 184 IPR013742 GO:0003697|GO:0006355|GO:0006952
Mal3g5077 225 MobiDBLite consensus disorder prediction 205 225 - -
Mal3g5077 225 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 22 225 - -
Mal3g5077 225 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 22 225 IPR013742 GO:0003697|GO:0006355|GO:0006952
Mal3g5077 225 SUPERFAMILY ssDNA-binding transcriptional regulator domain 43 207 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5077 Mal-Chr3 130827419 130830256 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5077 1 225 Whirly Transcription Factor Family AT1G71260 56.904 1.09e-89 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Mal3g5077 Whirly 1.2e-54 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5077 - - gmx:100817863 321.242