Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5074 ATGGACTCCAATGACAACCAATTAACCTCTTTCTTCCACCACCACCACAACCACCAACAACACCACCAACAACAAAACTCCACCGCCGTAACTTCAACCACTACAACCACCACCACCGCATCTCCGGCGAACGGACTCTTATCAAACACAGATGGGTCCCACATACTCTACCCTCATTCAGTGGCTTCTTCTGCTGTGTCTTCTCAGCTTGAACCAGCTAAGAGGAAAAGAGGTAGACCTAGAAAGTATGGTACTCCTGAACAAGCCCTTGCTGCCAAAAAAGCCTCTACGTCGTCGTTTTCCCCTCCTCCTCCCTCTCTTGATAACAACAATAAGAACACTCACTCTTTCTCTCCCTCTCCTTCATTCACCTCTAAGAAATCTCATTCTCTCTCTCTAGGAAATGCAGGACAAGGTTTCAGTGCACATGTCATTGTTGTTAATGCTGGTGAGGATGTTGGCCAGAAAATTATGCAATTTATGCAACAAAATAGGGGCGAGATATGCATTCTGTCTGCATCTGGTTCCATCTCTAATGCCTCTCTTCGTCAACCAGCATCTTCGGGAGGCAACATTTCGTATGAGGGTCGGTTTGATATTATTTCGCTTGCTGGTTCCTATGTCCGTAATGAAACCGGAGGGCGAAGTGGTGGTCTTAGTGTATGCTTGTCTAATTCTGATGGACAAATCATAGGTGGTGGTGTTGGTGGGCCCCTTAAAGCTGCTGGTCCGGTTCAGGTCATTGTTGGTACATTTTTTATCGACAGCAAGAAGGATACTAGTGCTGGTGGAAAAGGTGATGCCTCTGCTGGTAAGTTGCCATCACCAGTTGGCGAACCAGCATCAAGTTTAGGTTTCCGCCAAACAGTTGACTGTTCCAGCGGGAATCCAATCCGAGGAAATGATGAACATCATGCTATGGGGGGAAGTCATTACATGATTCAACAGCTTGGTTTGCATGTGACACCTCCCAGGTCCACAGATTGGGGGAGTCATCCAGATTCAAGACATGCTGGTTATGACCTGTCAGGAAGAACAGGTCATGGGTCACACCAGTCTCCTGAGAACGGAGGCTATGACCAAATTCCTGATTGA 1095 0.4712 MDSNDNQLTSFFHHHHNHQQHHQQQNSTAVTSTTTTTTTASPANGLLSNTDGSHILYPHSVASSAVSSQLEPAKRKRGRPRKYGTPEQALAAKKASTSSFSPPPPSLDNNNKNTHSFSPSPSFTSKKSHSLSLGNAGQGFSAHVIVVNAGEDVGQKIMQFMQQNRGEICILSASGSISNASLRQPASSGGNISYEGRFDIISLAGSYVRNETGGRSGGLSVCLSNSDGQIIGGGVGGPLKAAGPVQVIVGTFFIDSKKDTSAGGKGDASAGKLPSPVGEPASSLGFRQTVDCSSGNPIRGNDEHHAMGGSHYMIQQLGLHVTPPRSTDWGSHPDSRHAGYDLSGRTGHGSHQSPENGGYDQIPD* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5074 364 Pfam Plants and Prokaryotes Conserved (PCC) domain 142 252 IPR005175 -
Mal3g5074 364 MobiDBLite consensus disorder prediction 22 70 - -
Mal3g5074 364 MobiDBLite consensus disorder prediction 259 306 - -
Mal3g5074 364 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 356 IPR039605 GO:0003680
Mal3g5074 364 CDD DUF296 143 252 IPR005175 -
Mal3g5074 364 MobiDBLite consensus disorder prediction 15 131 - -
Mal3g5074 364 MobiDBLite consensus disorder prediction 91 131 - -
Mal3g5074 364 SUPERFAMILY AF0104/ALDC/Ptd012-like 139 252 - -
Mal3g5074 364 Gene3D - 141 265 - -
Mal3g5074 364 ProSiteProfiles PPC domain profile profile. 136 277 IPR005175 -
Mal3g5074 364 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 14 1 356 - -
Mal3g5074 364 MobiDBLite consensus disorder prediction 322 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5074 Mal-Chr3 130803029 130807127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5074 27 364 AT-hook Motif Nuclear Localized (AHL) Family AT3G04590 49.591 3.14e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5074 - - gmx:100809675 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g5074 3 130803029 130807127 Mal3g5074 3 130803029 130807127 ECH