Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5073 ATGGAAAAAGGGTTTTCTTCCTTTTTGTTGTTGCTATTGTTGATGATTAGTTCTCTTGTGATATTTGTTTATGGGATTGATGGTGAATATGTACATTGCAACTGTGATGATGATGATGATAATGGGATTTGGAGTATACAAAGTATTTTAATTTGTCAAAAAGTCAGTGACTTTTTCATTGCTATTGCATATTTTTCAATACCCCTTGAGCTTCTTTACTTTGTTAGCTATTCCAATGTTCCATTTAAATTGGTATTCCTTCAATTTGTTGCTTTCATAGTTCTATGTGGTTTGACCCATTTACTCAATGCCTATACTTACTATGGCCCTCATTCCTTTCAATTGTTTCTATCTCTCACTGTTGCTAAATTCTTCACTGCCCTTGTTTCATGTGCCACTGCAATTACTTTTCCCACCTTGATTCCTCTTCTTTTGAAAATCAAGGTGAGGGAGTTTTTCTTGAAACAGAATGTGTTGGAATTGGGGCAAGAGGTTGGGATTATGAAGAAACAGAAGGAGGCTAGTTGGCATGTTAGGATGTTGACCCGCGAGATTAGGAAGTCTTTGGATAAGCATACGATTTTGTATACCACACTTGTTGAGCTTTCCAAGGCGTTGGAGTTGCATAATTGTGCCGTTTGGATGCCTGATGAGGATAGAAGGGTGATGCATTTGACTCATGAGTTGAAGCCGAATCCGGCGAAGAATTTTCATAGTTCTATTTCTGTAAATGATTTGGATGTGTTAGAGATTAGGAAGAGCAAGGGGGTGTCGATTTTGAGGCCTGATTCTGCACTTGGAGCTGCGAGTAGTGGTGGATCTGGGAACTCGGGTGCTGTAGCATCCATTCGTATGCCGATACTTCATGTTTCGAATTTCAAAGGAGGGACACCGGAGTTTGTTGAGACGTCTTATGCTATACTGGTTTTGGTTCTTCCGAAATCGAACTCAAGGGCTTGGACCCACCATGAGATGGAGATAGTGGAAGTAGTTGCTGACCAGGTTGCTGTGGCCTTGTCTCATGCATCTGTTCTTGAAGAGTCTCAGCTAATGAGACAGAAACTTGCAGAGCAAAACCGGGCGTTGCAACAGGCACAGAAGTATGCAATGATGGCCAGCCAGGCAAGGAGCTCATTTGAGAAAGTGATGAGCCATGGAATGAGGAGACCTATGCATTCAATCCTGGGCTTGCTTTCAATGTTTCAAGAGGATAATATAAGATCTGAACAGAAGATTGTTGTTGACACAATATTGAAAGTTAGCAACTCGCTCTCACGTTTGATAAATGATGTAATGGAGATTTCGGCCAACGACAAAGGAAGTTTCCAGTTAGAGTTGAAACATTTCCATCTACATTCCATGATGAGGGAAGCTTCTTGCATTGCCAAGTGTTTGTGTGTATATAAAGGCTTTGGTCTTGAAATTGACGTGCAGAGATCTTTGCCTGATATGGTAATAGGTGATGAGGCAAGGTCTTTTCAATTAATTTTGCATATGATTGGCTATTTATTGAACTTATATGATAGAGGGACTCTCGTTTTTCAAGTTTCTCTTGAAAGTGATACCGCAGATAAGGATGATAGAAGTTCTGGAATATGGAGATCAACCATGCAAAATGATAATGTATACATAAAATTTAATTTCCAGATAACTGGTACTAGTTCCCATTCAGATGAATCAATTTTAACTATGCACCGCAGCAATGAACCTAAGGAGGGGCTGAGCTTCAGCATTTGCAAAACGTTGGTGCAGATGATGGAAGGTAATATCTGGATATCACCAAACTCTCTGGGTTTGGCACAAGGGATGACACTTCTTCTCAAGTTTCAATCAGGATCATCGCACGGAAGATTCGTTCTTGCTAACAAAGATTTTTCAAACCAACAGTTTAGAGGGCTTAACGTTATTTTAGCCGATGATGATAACGTAAACAGGACTGTAACTAAGAAGCTGCTTGAGAAACTGGGTTGTCAAGTAACTGATGTTTCATCGGGTTTTGATTGTTTGGCTGCTATAACTGCCACCAGTATGCCATTCAAAATTATCCTATTGGATCTTCACATGCCTGAAATGGATGGTTTTGAAGTTGCTAGTAAGATTCGGAAGTTCCATAGCCGAAATTGGCCCCTGATTATTGCTCTTACAGCAAGTGCAGAAGAACGCATAAAGGAGAGATGCCTCCAGGTGGGAATGAATGGATTGATTCGAAAACCTATCCTTCTTCATGAGATATCTGATGAACTTAGAACAGTCCTGCTACGTGCAGGTGAAAAATTCTAA 2280 0.4026 MEKGFSSFLLLLLLMISSLVIFVYGIDGEYVHCNCDDDDDNGIWSIQSILICQKVSDFFIAIAYFSIPLELLYFVSYSNVPFKLVFLQFVAFIVLCGLTHLLNAYTYYGPHSFQLFLSLTVAKFFTALVSCATAITFPTLIPLLLKIKVREFFLKQNVLELGQEVGIMKKQKEASWHVRMLTREIRKSLDKHTILYTTLVELSKALELHNCAVWMPDEDRRVMHLTHELKPNPAKNFHSSISVNDLDVLEIRKSKGVSILRPDSALGAASSGGSGNSGAVASIRMPILHVSNFKGGTPEFVETSYAILVLVLPKSNSRAWTHHEMEIVEVVADQVAVALSHASVLEESQLMRQKLAEQNRALQQAQKYAMMASQARSSFEKVMSHGMRRPMHSILGLLSMFQEDNIRSEQKIVVDTILKVSNSLSRLINDVMEISANDKGSFQLELKHFHLHSMMREASCIAKCLCVYKGFGLEIDVQRSLPDMVIGDEARSFQLILHMIGYLLNLYDRGTLVFQVSLESDTADKDDRSSGIWRSTMQNDNVYIKFNFQITGTSSHSDESILTMHRSNEPKEGLSFSICKTLVQMMEGNIWISPNSLGLAQGMTLLLKFQSGSSHGRFVLANKDFSNQQFRGLNVILADDDNVNRTVTKKLLEKLGCQVTDVSSGFDCLAAITATSMPFKIILLDLHMPEMDGFEVASKIRKFHSRNWPLIIALTASAEERIKERCLQVGMNGLIRKPILLHEISDELRTVLLRAGEKF* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5073 759 CDD REC_ETR-like 633 748 - -
Mal3g5073 759 SUPERFAMILY GAF domain-like 193 342 - -
Mal3g5073 759 Coils Coil 345 365 - -
Mal3g5073 759 PIRSF Ethylen_sen_hybr_HK 6 758 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mal3g5073 759 SUPERFAMILY CheY-like 629 752 IPR011006 -
Mal3g5073 759 ProSiteProfiles Response regulatory domain profile. 634 752 IPR001789 GO:0000160
Mal3g5073 759 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 444 595 IPR036890 -
Mal3g5073 759 ProSiteProfiles Histidine kinase domain profile. 382 613 IPR005467 -
Mal3g5073 759 CDD HisKA 373 435 IPR003661 GO:0000155|GO:0007165
Mal3g5073 759 Pfam His Kinase A (phospho-acceptor) domain 376 439 IPR003661 GO:0000155|GO:0007165
Mal3g5073 759 PANTHER TWO-COMPONENT HISTIDINE KINASE 9 752 - -
Mal3g5073 759 SMART gaf_1 190 349 IPR003018 GO:0005515
Mal3g5073 759 Gene3D - 619 752 - -
Mal3g5073 759 SMART REC_2 633 748 IPR001789 GO:0000160
Mal3g5073 759 Pfam GAF domain 192 339 IPR003018 GO:0005515
Mal3g5073 759 CDD HATPase_ETR2_ERS2-EIN4-like 481 607 - -
Mal3g5073 759 SMART HisKA_10 375 440 IPR003661 GO:0000155|GO:0007165
Mal3g5073 759 Gene3D - 439 612 IPR036890 -
Mal3g5073 759 Gene3D - 174 339 IPR029016 -
Mal3g5073 759 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 360 440 IPR036097 GO:0000155|GO:0007165
Mal3g5073 759 Pfam Response regulator receiver domain 635 746 IPR001789 GO:0000160
Mal3g5073 759 PANTHER ETHYLENE RECEPTOR 9 752 - -
Mal3g5073 759 Gene3D - 340 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5073 Mal-Chr3 130792352 130795723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5073 27 757 Miscellaneous Gene Families AT3G04580 61.467 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal3g5073 GAF 8.7e-13 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5073 K14509 - gmx:100805023 1201.04