Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5047 ATGAGGATTATGATAAAGGGAGGTGTTTGGAAGAACACCGAAGATGAAATCCTGAAAGCTGCTGTTATGAAATATGGTAAAAATCAGTGGGCTCGTATATCTTCACTTCTTGTTCGCAAATCTGCAAAACAGTGTAAAGCTCGTTGGTATGAGTGGTTAGATCCTTCGATTAAGAAGACCGAATGGACTAGGGAAGAGGATGAGAAGCTACTTCATCTTGCTAAGCTTATGCCTACTCAGTGGAGAACCATTGCTCCAATTGTTGGCCGTACTCCTTCGCAATGTCTTGAACGGTATGAGAAACTCCTTGACGCGGCTTGTGTGAAGGATGATAACTATGAGCCTGGTGATGATCCTAGGAAATTGCGTCCAGGGGAGATTGATCCGAATCCTGAGTCGAAGCCTGCGCGGCCTGATCCTGTTGATATGGATGAGGATGAGAAGGAAATGCTTTCCGAAGCACGTGCTCGGTTGGCTAACACGAAAGGTAAGAAAGCAAAAAGGAAAGCTAGGGAGAAACAGCTTGAGGAAGCTAGGAGGCTTGCTTCTTTACAGAAAAAGAGAGAATTGAAGGCTGCTGGGATTGATATTAGGCAGCGGAGGAGGAAAAGGAGAGGGATAGACTATAATGCAGAAATTCCGTTTGAGAAGAGGCCTCCTCCGGGTTATTTTGATGTTGCTGATGAGGATAGGGCGGTGGAGCAGCCCGCATTCCCTACTACTATTGAAGAACTAGAGGGGAAAAGAAGGATTGATGTTGAGGCGCAGCTGAGAAAGCAAGACGTTGCAAGGAATAAAATTGCAGAGAGGCAAGATGCCCCGGCTGCTATTCTGCATGCCAACAAGCTGAATGATCCAGAAACAGTTAGAAAGAGATCAAAACTGATGCTTCCACCACCCCAGATTTCTGACCAAGAGTTGGATGAAATTGCCAAGTTGGGTTATGCCAGTGACCTTGTGGGCAGCGAGGAACTCACCGAAGGCAGCAGTGCTACCCGTGCTCTTCTCCCTAATTATCCACAGACACCCAACCGAGCCATGACCCCTTTAAGAACTCCGCAGAGAACACCAGCTAGTAAAGGAGATGCTATCATGATGGAAGCTGAAAATTTGGCCAGGATGAGGGAATCTCAGACACCACTGTTAGGAGGAGAGAACCCGGACTTACATCCTTCGGATTTTTCTGGGGTCACTCCTAAGAAAAAGGAAATTCACACTCCAAACCCACTGCTGACTCCCTCTGCAACCCCTGGAAGTGCAGGCCTTACTCCCAGAAGTGGTATGACGCCGGCAAGGGATGGTTTTTCTTTTGGCATGACTCCAAAGGGAACTCCTCTAAGGGATGAGCTGCATATCAATGAAGATATGGAGATGCATGACAGTGCTAAACTCGAGCTACGAAGACAAGCTGATATGAAAAAAAGTTTGCGCTCTGGTTTAAGCAGCCTTCCACAGCCTAAAAATGAGTACCAGATAGTGATGCAACCAGTTCAAGAAGATGCTGAAGAGCCCGAGGAGAAGATTGAAGAGGATATGTCCGATAGAATGGCTAGAGAAAAGGCAGAAGAAGAGGCACGACAGCAGGCATTACTTAGAAAACGATCCAAAGTCCTTCAAAGGGAACTTCCTAGGCCTCCTCAAGCATCTCTGGAGCTTATTAGGAACTCTTTGATAAGAGCTGACGGAGACAAGAGTTCATTTGTTCCACCAACTCCTATTGAGCAAGCCGACGAGATGATAAGAAAGGAGCTTCTAGCCTTACTGGAGCATGACAATGCTAAGTATCCACTTGAGGAGATAGCAAATAAGGAGAGAAAGAAAGGATCTAAACGAGCAGCAAATGGGCCTGCTGTCCCAGTCATAGAAGATTATCATGAGGATGAGATGAAATCTGCTGATCAGTTGATAAAAGATGAAGCCCAGTATCTTCGTGAGGCAATGGGCCATGAAAATGATTCTCTTGAGGAATTTGTTGAAGCGCATACAACTTGCATTAATGATTTAATGTACTTTGAAACCCGTAATGCCTATGGTCTATCAAGTGTTGCTGGAAACATGGAGAAGCTAGCAGCTTTGCAGAATGAATTTGAGAATGTGAAAAGTAAGTTGGATGATGGTAAGGAGAAGATGATACGACTTGAGAAGAAGGTTACAGTACTCACGCAAGGGTATGAGTTGAGATCAAAAAAAGGTCTTTGGCCACAAATTGAGGCCACTTTCAAGCAGATGGATGTGGCTGCAACAGAATTCGAGTGTTTCCAAGCTTTAAAAAAGCAGGAGCAGTTAGCAGCATCGCATAGGATAAACAATCTTTGGTCTGAAGTTCAAAAGCAAAAGGAACTTGAGAGAACTTTACAGAAGAGATATGGAGATCTTATGGCAGAGCTGGAAAGGACACGGAGTGTAATGGAGCAATTCAGGGTAGAAGCACAACAGAAGGAAGAAATTGAAGAAAAGAATCATGCAATGGAAGAGGTACAAGCACAACAGCAAGAAGAAACCGAAGCAAAGAATCACATACTCGAGAGTACTGAAGCCACAGCTAATGGAATTACTACTGTGCAGGGTACAGAAAATTGTGAAGCTGTACCCCTCTCAGCTGACGAACAAATAGCCACCCTGCAAGATCAGGCTACTTCTAGCTCCAAAATCGATATGGATGTGGATTCTAGTGAAGCACAAATGACAGACAGCACTGGTGTTACATTGCCAGATGGACCTGCTGCAGAGGATGAGAGTTCAAAAATTGTAGAAGATAAAAACATTGAAAGTTATATTGGAAATAGTGAGACCACAGTAGATATGAGTGCTGCAGTGGAAATAAAAAGTAATGAGGGAAACAGGGAGGGTCAAGATGTTGGGAGTCCAGATGAGGTTGTGGAACCTGCAAATCAACCTGATGATGGTAGCGTAAAAGAAACTACCCCGGTTGATGACATGCAAGTTGCTGATGGTAAAGGAGACGAGGCAAATTAG 2976 0.4472 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDDNYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRQRRRKRRGIDYNAEIPFEKRPPPGYFDVADEDRAVEQPAFPTTIEELEGKRRIDVEAQLRKQDVARNKIAERQDAPAAILHANKLNDPETVRKRSKLMLPPPQISDQELDEIAKLGYASDLVGSEELTEGSSATRALLPNYPQTPNRAMTPLRTPQRTPASKGDAIMMEAENLARMRESQTPLLGGENPDLHPSDFSGVTPKKKEIHTPNPLLTPSATPGSAGLTPRSGMTPARDGFSFGMTPKGTPLRDELHINEDMEMHDSAKLELRRQADMKKSLRSGLSSLPQPKNEYQIVMQPVQEDAEEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRELPRPPQASLELIRNSLIRADGDKSSFVPPTPIEQADEMIRKELLALLEHDNAKYPLEEIANKERKKGSKRAANGPAVPVIEDYHEDEMKSADQLIKDEAQYLREAMGHENDSLEEFVEAHTTCINDLMYFETRNAYGLSSVAGNMEKLAALQNEFENVKSKLDDGKEKMIRLEKKVTVLTQGYELRSKKGLWPQIEATFKQMDVAATEFECFQALKKQEQLAASHRINNLWSEVQKQKELERTLQKRYGDLMAELERTRSVMEQFRVEAQQKEEIEEKNHAMEEVQAQQQEETEAKNHILESTEATANGITTVQGTENCEAVPLSADEQIATLQDQATSSSKIDMDVDSSEAQMTDSTGVTLPDGPAAEDESSKIVEDKNIESYIGNSETTVDMSAAVEIKSNEGNREGQDVGSPDEVVEPANQPDDGSVKETTPVDDMQVADGKGDEAN* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5047 991 MobiDBLite consensus disorder prediction 323 360 - -
Mal3g5047 991 MobiDBLite consensus disorder prediction 323 355 - -
Mal3g5047 991 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Mal3g5047 991 Coils Coil 167 187 - -
Mal3g5047 991 MobiDBLite consensus disorder prediction 404 424 - -
Mal3g5047 991 Gene3D - 59 114 - -
Mal3g5047 991 SMART sant 6 55 IPR001005 -
Mal3g5047 991 SMART sant 58 105 IPR001005 -
Mal3g5047 991 Pfam Myb-like DNA-binding domain 10 70 - -
Mal3g5047 991 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Mal3g5047 991 MobiDBLite consensus disorder prediction 498 528 - -
Mal3g5047 991 Gene3D - 5 58 - -
Mal3g5047 991 Coils Coil 689 716 - -
Mal3g5047 991 Coils Coil 809 836 - -
Mal3g5047 991 CDD SANT 10 53 IPR001005 -
Mal3g5047 991 MobiDBLite consensus disorder prediction 510 528 - -
Mal3g5047 991 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Mal3g5047 991 CDD SANT_CDC5_II 55 106 - -
Mal3g5047 991 MobiDBLite consensus disorder prediction 927 991 - -
Mal3g5047 991 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Mal3g5047 991 MobiDBLite consensus disorder prediction 878 901 - -
Mal3g5047 991 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Mal3g5047 991 MobiDBLite consensus disorder prediction 110 150 - -
Mal3g5047 991 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 798 - -
Mal3g5047 991 MobiDBLite consensus disorder prediction 409 423 - -
Mal3g5047 991 MobiDBLite consensus disorder prediction 878 914 - -
Mal3g5047 991 Pfam pre-mRNA splicing factor component 406 655 IPR021786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5047 Mal-Chr3 130549887 130555727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5047 1 833 MYB-Related Transcription Factor Family AT1G09770 74.402 0.0 1225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal3g5047 Myb_Cef 4.1e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5047 K12860 - gmx:100790369 1456.43