Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5046 ATGCCTTCTTCATCTTCACCTGCTCTTCCCAGTCTTATGGAAAGCAATTATATGAAACCCCCGGATTCTTTTCATCGTTCACCTGTCAGAGGTCTGACAGCAAATCCTGCCTCATTGCAAGCTACATCATCGTATCCGATCAGAAGTGTTCGACCGGTGTTTTCAACCAATGCTGAATGTCCTGGCGGCATCCCTTTTCCCCCCATTTCACAGCATGATAAGCAATATCAAGAATCTCCCTTCGCTTCTCAGACATTAGGTGACAACGTGTCTTCGGAAATCCACTCAGCAACATTCACTTCTCACCTTCAAGAAAATGATGATATATCATGGGGACCAGATCCATTGCAGGATATTCTTGCTTTTCCTGAAATTTTTTCTGTCCAGCATGATCAGGTGGAAAACAGTGCTTGTTATATGAATGAAGACAATGTCAAAAAATCTGATTTTGGGGAGTGGGTTGAACAGCTAATGACAAGTGATGATTCTGTTAATCCAAATTGGAGTCAGCTTCTTGGTGATGACAATGTTGCTGAACCAACACAAAAGGCAATGCAGGTTTCTCAAAAGCAGCATACACCATCTGGAAAAGTTAACACTCTTTGTAATCCAGCTTCAGCTTCAGCATCAGCATCAACTGCATCTCAAACTAAGCCTAGAATGCGTTGGAGTCCAGAACTTCACGAGGCCTTTGTGGAAGCAGTTAACCAGCTTGGTGGTAGCGAGAAGGCTACTCCAAAAGGTGTCTTGAATCTGATGAATGTTGAGGGCCTTACCATCTACCATGTAAAAAGCCACCTCCAGAAGTATAGAACTGCCAGATACAAACCTGAGTCACCAGAAGAAACTTCTGAGAAAAAGATGAGTTCAATTGAGGAAATGAAATCTCTAGACTTGAAAACGAGTAAGGGAATCACTGAAGCATTACGGTTGCAGATGGAACTCCAGAAGCGGCTTCACGAACAACTTGAGATTCAAAGGAAGTTGCAGATTCAAATTGAAAACCAAGGGAAACATCTTGAGATGATGTTTGAGAAACAGAAACAGATCGGTGACAACAAGGGCCCTTCGCCTTCAAATGCGCCTTCTGCTGCAGTCTTGGACACGCTACCTTCTTCTCCAGTGGACAATTCAAAAACTTCAAATGATGAACGCGACAAATCAGGATGTAACGCTGACATTCCTAACATACCCGGAGAAAGTTCTCAGGATGCAAGCAGAAATCAAATGGCAGATGAAGCTGAAGTTACCAATGAACATGAGAGGGTAGATGATCAGTTTTCTGCCGTACCTCCAACAAAACGGGCGAAGATTCAATGA 1320 0.4318 MPSSSSPALPSLMESNYMKPPDSFHRSPVRGLTANPASLQATSSYPIRSVRPVFSTNAECPGGIPFPPISQHDKQYQESPFASQTLGDNVSSEIHSATFTSHLQENDDISWGPDPLQDILAFPEIFSVQHDQVENSACYMNEDNVKKSDFGEWVEQLMTSDDSVNPNWSQLLGDDNVAEPTQKAMQVSQKQHTPSGKVNTLCNPASASASASTASQTKPRMRWSPELHEAFVEAVNQLGGSEKATPKGVLNLMNVEGLTIYHVKSHLQKYRTARYKPESPEETSEKKMSSIEEMKSLDLKTSKGITEALRLQMELQKRLHEQLEIQRKLQIQIENQGKHLEMMFEKQKQIGDNKGPSPSNAPSAAVLDTLPSSPVDNSKTSNDERDKSGCNADIPNIPGESSQDASRNQMADEAEVTNEHERVDDQFSAVPPTKRAKIQ* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5046 439 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 439 IPR044848 GO:0003700
Mal3g5046 439 MobiDBLite consensus disorder prediction 272 295 - -
Mal3g5046 439 MobiDBLite consensus disorder prediction 349 439 - -
Mal3g5046 439 Pfam MYB-CC type transfactor, LHEQLE motif 305 349 IPR025756 -
Mal3g5046 439 MobiDBLite consensus disorder prediction 1 38 - -
Mal3g5046 439 Gene3D - 217 276 - -
Mal3g5046 439 MobiDBLite consensus disorder prediction 188 220 - -
Mal3g5046 439 SUPERFAMILY Homeodomain-like 216 272 IPR009057 -
Mal3g5046 439 Coils Coil 306 326 - -
Mal3g5046 439 MobiDBLite consensus disorder prediction 395 412 - -
Mal3g5046 439 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 215 275 IPR017930 -
Mal3g5046 439 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 218 272 IPR006447 GO:0003677
Mal3g5046 439 Pfam Myb-like DNA-binding domain 220 271 IPR001005 -
Mal3g5046 439 MobiDBLite consensus disorder prediction 413 428 - -
Mal3g5046 439 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 439 - -
Mal3g5046 439 MobiDBLite consensus disorder prediction 352 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5046 Mal-Chr3 130538693 130541609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5046 93 377 G2-like Transcription Factor Family AT3G04450 48.829 1.17e-79 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal3g5046 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5046 - - mtr:MTR_7g115530 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g5046 3 130538693 130541609 Mal1g1311 1 16780819 16783393 PCT