Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5043 ATGACGGAAGAGGAACCAAAGTCTCTCAACTATATTCCAGAGGCTATACTGAAAAAGAGGAAAAACAGTGAAGCATTTGCATTGAGAAAAAAGGCGCAATTCCAGCAAAAAAGTTTCCAAATTAGGAAAAGCAAGGACTTTATAAAAAAGCCCGAGGATTTCATTTTTGAATATCGCAACAGGGAGGTGGACCTTATTAGAATGAAACGCAGACTCAAGACAGTCAAGAAGAAACAGCCAGAACTATCGACTCCAAACAACAAGCCTATAGTAGTCATTCGTATACAGGGAAAACAAGACATGCATCCTACAACCAGAAGGCACTTACTCAACTTGGGATTGAGAAGAATGTTCAGTGTTGTCTTTGTGAAGCCCACTGATGGTGTGATGGCCAAGATGACTAGAGTGGAGCCATATGTTACCTATGGATATCTAAATCTTAAAAGCATAAAGGAACTAATTTACAAGAAGGGGCATGCAAAATTAGATAAGCAGAAAGTTCCTTTGACGGACAATAACATTATTGACCAGGAACTAGGAAAGTTTGGTATTGTATGCATAGAAGATATCGTGCATCAAATTGACAATGTTGGTCCACGCTTTAAGGAAGTTGTCAAATTTATGTGGCCCTTTGAACTCAACAAGCCAGTAATAGGATTGAAAGGATCAAAAACAAGATACAAGGACGGTGGAGATGCAGGGAACCGTGAGGATCTCATAAACGAGCTCATTAATAAAATGAATTAA 747 0.3882 MTEEEPKSLNYIPEAILKKRKNSEAFALRKKAQFQQKSFQIRKSKDFIKKPEDFIFEYRNREVDLIRMKRRLKTVKKKQPELSTPNNKPIVVIRIQGKQDMHPTTRRHLLNLGLRRMFSVVFVKPTDGVMAKMTRVEPYVTYGYLNLKSIKELIYKKGHAKLDKQKVPLTDNNIIDQELGKFGIVCIEDIVHQIDNVGPRFKEVVKFMWPFELNKPVIGLKGSKTRYKDGGDAGNREDLINELINKMN* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5043 248 CDD Ribosomal_L7_archeal_euk 90 248 IPR035808 -
Mal3g5043 248 Gene3D - 193 248 IPR036919 -
Mal3g5043 248 Gene3D - 90 192 IPR036919 -
Mal3g5043 248 Pfam Ribosomal protein L30p/L7e 91 140 IPR016082 -
Mal3g5043 248 PANTHER 60S RIBOSOMAL PROTEIN L7 3 248 IPR039699 -
Mal3g5043 248 Pfam Ribosomal L30 N-terminal domain 12 74 IPR012988 -
Mal3g5043 248 SUPERFAMILY Ribosomal protein L30p/L7e 91 248 IPR036919 -
Mal3g5043 248 PANTHER 60S RIBOSOMAL PROTEIN L7-1 3 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5043 Mal-Chr3 130513294 130515125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5043 1 248 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 51.200 8.07e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5043 K02937 - gmx:100306107 359.377