Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5029 ATGGCTCCCAATGCTTCCGACGCACTTGCAGTGAGGCAGAAAGTTCAACACTTCCTCAAAGCTGCTCGCACCGGAAATCTCGATCTCTTAAAGAAATTTGCGGAACAGTTAGATGAGGGAAAAGATTTAGCCAAAACAGTGGAAGCAATCAAAGACGGAAACAAGCGTGGAGCACTTCACTTTGCAGCTCTTGAAGGACAAACTGAGATTTGCAGTTACCTATTAAAGGATTTGAAGCTTCCTGTTGATTCCAAAGATGATGATGGCGAAACTGCTCTCATTCATGCTGCACGTCAGGGACACACTGCTACTGCTAAGTATCTTATTGACCAGGGAGATACTGAGTTACTTGAGCATTTGCTGTCCAAAGGAGTTAATCCCGACTTAGAAAGTGATGCGGGAACACCATTGGTTTGGGCTGCTGGTCATGCTCAAGAAGCTGCTGTTACTGTTCTATTAAAACATGGTGCAAATCCCAATGCTGAAACTGATGATGGCATTACCCCACTCCTTTCATCTGTTGCAGCGGATTCTTTGGCATGCTTAGAGCTGTTAATACAGGCAGGTGCTAAAGTAAATGTTAGTGCTGGTGGAGCAACTCCTTTGCACATCGCTGCTGATAATGGAAGTCTAGAACTTATAAACTCCTTGCTGAAAGCTGGAGCTGATCCTAATGTCTCTGATGAGGATGGTGTTAAGCCAATACAGGTTGCAGCTGGAAGGGGTAATCGTGGAGCTGTTGAGATATTGTTCCCTGTGACATCCAAAATTGATGCTATTCCTTCTTGGACTATTGATGGGATACTTGAGCATATGCAATCAGAAAGTAAAAAGCAGCAGGATGAATTGGTAAATGCTAAAGAAAATAACCGGTCTGTGGATGCTGTTTCTCGAGAGCAAAATATCCCTGAGGTGTCACCTGAAGCCAAAAAGAGAGCAGCAGAATCAAAATCAAGAGGGGATGAGGCTTTTAAAAGGAATGACTACCATACGGCTATAGATTCCTATACACAAGCAATTGATTTGAATCCCGGTGATGGTACATTGCTTTCAAATAGAAGTCTATGTTGGATGAGGCTAGGTCAAGCTGAGCATGCTTTAGCTGATGCAAAGGCCTGTAGAGCATTAAGACCAGATTGGTCTAAAGCTTGTTATAGAGAAGGTGCAGCCTTGCGTTTGTTGCAGAGGTTTGATGAAGCTGCAAATGCTTTTTATGAGGGAGTAACACTTGACCCTGAGAGCAAGGAGCTTGTAAATGCGTTCAGGGAAGCTGTTGAAGCTGGAAGGAAATTTCATGGCACAACGAACAATAAATCGTAG 1320 0.4364 MAPNASDALAVRQKVQHFLKAARTGNLDLLKKFAEQLDEGKDLAKTVEAIKDGNKRGALHFAALEGQTEICSYLLKDLKLPVDSKDDDGETALIHAARQGHTATAKYLIDQGDTELLEHLLSKGVNPDLESDAGTPLVWAAGHAQEAAVTVLLKHGANPNAETDDGITPLLSSVAADSLACLELLIQAGAKVNVSAGGATPLHIAADNGSLELINSLLKAGADPNVSDEDGVKPIQVAAGRGNRGAVEILFPVTSKIDAIPSWTIDGILEHMQSESKKQQDELVNAKENNRSVDAVSREQNIPEVSPEAKKRAAESKSRGDEAFKRNDYHTAIDSYTQAIDLNPGDGTLLSNRSLCWMRLGQAEHALADAKACRALRPDWSKACYREGAALRLLQRFDEAANAFYEGVTLDPESKELVNAFREAVEAGRKFHGTTNNKS* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5029 439 Pfam Tetratricopeptide repeat 320 345 IPR019734 GO:0005515
Mal3g5029 439 ProSiteProfiles TPR repeat profile. 381 414 IPR019734 GO:0005515
Mal3g5029 439 ProSiteProfiles Ankyrin repeat profile. 88 112 IPR002110 GO:0005515
Mal3g5029 439 Gene3D Tetratricopeptide repeat domain 311 426 IPR011990 GO:0005515
Mal3g5029 439 Gene3D - 7 110 IPR036770 -
Mal3g5029 439 SMART ANK_2a 132 161 IPR002110 GO:0005515
Mal3g5029 439 SMART ANK_2a 54 84 IPR002110 GO:0005515
Mal3g5029 439 SMART ANK_2a 230 259 IPR002110 GO:0005515
Mal3g5029 439 SMART ANK_2a 88 118 IPR002110 GO:0005515
Mal3g5029 439 SMART ANK_2a 165 194 IPR002110 GO:0005515
Mal3g5029 439 SMART ANK_2a 197 226 IPR002110 GO:0005515
Mal3g5029 439 SUPERFAMILY Ankyrin repeat 18 251 IPR036770 -
Mal3g5029 439 ProSiteProfiles Ankyrin repeat region circular profile. 88 112 - -
Mal3g5029 439 MobiDBLite consensus disorder prediction 304 323 - -
Mal3g5029 439 ProSiteProfiles Ankyrin repeat profile. 197 229 IPR002110 GO:0005515
Mal3g5029 439 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 8 435 - -
Mal3g5029 439 ProSiteProfiles Ankyrin repeat region circular profile. 197 229 - -
Mal3g5029 439 MobiDBLite consensus disorder prediction 274 294 - -
Mal3g5029 439 ProSiteProfiles Ankyrin repeat region circular profile. 165 194 - -
Mal3g5029 439 SMART tpr_5 381 414 IPR019734 GO:0005515
Mal3g5029 439 SMART tpr_5 313 346 IPR019734 GO:0005515
Mal3g5029 439 SMART tpr_5 347 380 IPR019734 GO:0005515
Mal3g5029 439 Pfam Ankyrin repeats (3 copies) 20 112 IPR002110 GO:0005515
Mal3g5029 439 Pfam Ankyrin repeats (3 copies) 165 228 IPR002110 GO:0005515
Mal3g5029 439 SUPERFAMILY TPR-like 312 424 IPR011990 GO:0005515
Mal3g5029 439 ProSiteProfiles TPR repeat profile. 313 346 IPR019734 GO:0005515
Mal3g5029 439 Gene3D - 111 305 IPR036770 -
Mal3g5029 439 ProSiteProfiles Ankyrin repeat profile. 165 197 IPR002110 GO:0005515
Mal3g5029 439 Coils Coil 269 289 - -
Mal3g5029 439 MobiDBLite consensus disorder prediction 274 323 - -
Mal3g5029 439 ProSiteProfiles Ankyrin repeat profile. 132 164 IPR002110 GO:0005515
Mal3g5029 439 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 8 435 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5029 111 310 Ion Channels AT4G32500 28.922 6.57e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5029 - - gmx:100798118 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g5029 3 130366771 130372063 Mal3g5029 3 130366771 130372063 ECH