Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5021 ATGCACCGCCTTTGCTATGTCTCGGAATGTGGCCCTTCTGGAAATGATGAGGAACCTTCCATGCAAAAGAAACCTGCTGTTACAATTAGGGCAACAACAAGTGGATCCTCAGATGATGAGGAAGTTGAGGGAGATATTAATATGAATGGAGGCATGAACCCTTCTGATGCAAAACGAGATAGGAGAATGCTCTCTAATAGGGAATCAGCTAGGCGCTCAAGAAGTCGAAAGCAAGCTCAATTTACTGAGCTTGAAACACAGGTCTCTGAATTAAGAGATCAAAATTCTTCATTGTCAAAGCGGTTAACAGATGTGACCCAAAAACACAACGATTCTGCTGTTGACAACAGAATATTAAATGCTGAACTTGAAGCATTAAGAGCAAAGGTGAAGATGGCTGAAGAGACAGTTATAAGATTAACTGGATCGTACCCGGTTAATGCAATGTCGAACGCATCATCAATGAGAACGTCATTATTTGATGGAAGTCCTTCCGATGCATCTGTGCCTGTGCATGAAGATCCAAATAATCACTTTTTTCAACCAACTTTTAATAATCTTATGTCCAGTCATGATATGGGAGGAGGAGTCAATAATGGTTTGGGAGGCATTTTTTCTTCAGCTGAAAGTGTGCAGAAGAACACTGTAGCAGGTGGGAGCAAGATAGGACCAACAAATTCCTTGCCGCAGGTGGCTAGCTTGGAATATCTTCAGAATTGGATTCGTGGTGGTGCCGAAGATGCAAATGATAGAGTAATTTGA 762 0.4173 MHRLCYVSECGPSGNDEEPSMQKKPAVTIRATTSGSSDDEEVEGDINMNGGMNPSDAKRDRRMLSNRESARRSRSRKQAQFTELETQVSELRDQNSSLSKRLTDVTQKHNDSAVDNRILNAELEALRAKVKMAEETVIRLTGSYPVNAMSNASSMRTSLFDGSPSDASVPVHEDPNNHFFQPTFNNLMSSHDMGGGVNNGLGGIFSSAESVQKNTVAGGSKIGPTNSLPQVASLEYLQNWIRGGAEDANDRVI* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5021 253 MobiDBLite consensus disorder prediction 1 104 - -
Mal3g5021 253 PANTHER BZIP TRANSCRIPTION FACTOR 8 237 - -
Mal3g5021 253 Pfam Basic leucine-zipper C terminal 125 245 IPR020983 -
Mal3g5021 253 Coils Coil 74 108 - -
Mal3g5021 253 SUPERFAMILY Leucine zipper domain 58 108 IPR046347 GO:0003700|GO:0006355
Mal3g5021 253 MobiDBLite consensus disorder prediction 55 79 - -
Mal3g5021 253 Pfam bZIP transcription factor 57 106 IPR004827 GO:0003700|GO:0006355
Mal3g5021 253 Gene3D - 57 111 - -
Mal3g5021 253 PANTHER BASIC LEUCINE ZIPPER 63 8 237 - -
Mal3g5021 253 Coils Coil 116 143 - -
Mal3g5021 253 MobiDBLite consensus disorder prediction 80 103 - -
Mal3g5021 253 SMART brlzneu 54 118 IPR004827 GO:0003700|GO:0006355
Mal3g5021 253 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 56 108 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5021 Mal-Chr3 130250759 130252926 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5021 17 211 bZIP Transcription Factor Family AT5G24800 38.647 4.61e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal3g5021 bZIP_C 4e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g5021 3 130250759 130252926 Mal3g5021 3 130250759 130252926 ECH
Mal3g5021 3 130250759 130252926 Mal1g1341 1 17272326 17277143 PCT