Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5020 ATGGAAAGAGTGTTATCAATTGCTGAAATAACGGAGCAATATTGGTTGAATTCAAAAGCATGCAAGGAGGGAGAGACAAAGATGAATAGGAGTGATTCAGAATGGTTTTTCCAAAAGTTTTTACAGGAACAGGAAGAAGCTGCTGAAGAAGCAAATACTGCTAAGCCTTGTTCTTCATCTTCAACTTCAACTTCTTCTTCCAACGTTGATGTCAAACTCAAAATCAATAATAATATTGATTCAGATGATTATCAGGCTCTTCTCAAGACCAAGCTTAATCTCGCCTGCGCCGCCGTCGCTAAGTCTCGGGGATCTTTGGTCAAAACTCAGGATCCTGACAATGGATCACAGCCATCTTATCCTTCTGAACTTGGACCTCTGGCTAATTTGAAAGAATTTGGCCCTTCTGGAAATGATCCATCTAAATTACAAAATAAAGATATCAAAGTTGCTGTTGGGGCTCCAAAGAAACCTGCTGTTACAATCAGGTCAACAACAAGTGGATCATCAGATGATGATGAAGCTGAGGGAGAGATTAATATGAATGGAGCCAACCCTACCGATGCAAAACGAGTAAGGAGGATGCTCTCTAATAGGGAATCAGCTAGACGCTCAAGAAGAAGAAAGCAAGCTCATTTAACTGAGCTTGAAACACAGGTCTCTGAATTAAGAGGTGAAAATTCTTCATTGTTAAAGCGTTTGACAGATGTGACCAAAAGATACAATGATTCTGCTGTTGACAACAGAATATTAAAAGCTGATGTTGAAACATTAAGAGCAAAGGTGAAGATGGTTGAAGAGACAGTCAAAAGATTTACAGGGTCCAACTCAATGTTTAATGCAATGTCTGAGATATCATCAATGGGAATGGGAATGTCATTATTTGATGGAAGTCCTTCTGAGTCATCAGCTGATGCATCTGTGCCTGTGCAAGAAGATCCAAATAATCACTTTTGTCAACCAACTTCTAATAGTCTTATGGCCAGTCATGGTATGAGAGGAGTCAATAATATCATTATTTCTTCAGCGGAAAGTGTACAGAAGAACATTGCAGCTGGTGGGAACAAGATAGGACGAACAAATTCACTGCCTCGGATTCGCGGCGCCGAAGAAGACAAGTGA 1122 0.4011 MERVLSIAEITEQYWLNSKACKEGETKMNRSDSEWFFQKFLQEQEEAAEEANTAKPCSSSSTSTSSSNVDVKLKINNNIDSDDYQALLKTKLNLACAAVAKSRGSLVKTQDPDNGSQPSYPSELGPLANLKEFGPSGNDPSKLQNKDIKVAVGAPKKPAVTIRSTTSGSSDDDEAEGEINMNGANPTDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSELRGENSSLLKRLTDVTKRYNDSAVDNRILKADVETLRAKVKMVEETVKRFTGSNSMFNAMSEISSMGMGMSLFDGSPSESSADASVPVQEDPNNHFCQPTSNSLMASHGMRGVNNIIISSAESVQKNIAAGGNKIGRTNSLPRIRGAEEDK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5020 373 Pfam bZIP transcription factor 189 241 IPR004827 GO:0003700|GO:0006355
Mal3g5020 373 Gene3D - 189 244 - -
Mal3g5020 373 SUPERFAMILY Leucine zipper domain 190 241 IPR046347 GO:0003700|GO:0006355
Mal3g5020 373 MobiDBLite consensus disorder prediction 351 373 - -
Mal3g5020 373 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 193 208 IPR004827 GO:0003700|GO:0006355
Mal3g5020 373 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 188 242 IPR004827 GO:0003700|GO:0006355
Mal3g5020 373 MobiDBLite consensus disorder prediction 104 187 - -
Mal3g5020 373 MobiDBLite consensus disorder prediction 47 68 - -
Mal3g5020 373 MobiDBLite consensus disorder prediction 53 68 - -
Mal3g5020 373 SMART brlzneu 186 250 IPR004827 GO:0003700|GO:0006355
Mal3g5020 373 MobiDBLite consensus disorder prediction 107 123 - -
Mal3g5020 373 Coils Coil 248 268 - -
Mal3g5020 373 PANTHER BASIC LEUCINE ZIPPER 63 1 368 - -
Mal3g5020 373 PANTHER BZIP TRANSCRIPTION FACTOR 1 368 - -
Mal3g5020 373 Coils Coil 199 233 - -
Mal3g5020 373 Pfam Basic leucine-zipper C terminal 257 366 IPR020983 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5020 Mal-Chr3 130245868 130248098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5020 1 279 bZIP Transcription Factor Family AT4G02640 37.578 2.02e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal3g5020 bZIP_C 1.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5020 K25784 - gmx:778137 371.703