Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5017 ATGGAGCTACCTTCGAACCTGTTGCCCGATGAGGCAAGCCCAGAGTGGATGAACAAAGGGGACAACGCATGGCAATTAACAGCAGCAACAATGGTTGGGCTTCAAAGCATTCCTGGGCTTGTAATACTTTACGGAAGCCTAGTGAAGAAAACATGGGCCATAAACTCTGCTTTCATGGCCTTTTATGCCTTTGCATCCGTTCTACTTTGTTGGGTTTCATGGGCTTACCACATGTCATTTGGGGAGAAAATGGTATTTTTCTTGGGGAAACCAAATGTAGCATTAGATGAAAAGTTTTTGTTGGGGAAAGCATTTTTAGGGAATTTTCCTAATTCTACAATGGTATTCTATCAAGGTGTGTTTGCTGGTCTTACTTTGATTTTGATAGCTGGTGCTTTACTTGGGAGAATGAACATTCGTGCGTGGATGTTATTTGTGCCACTTTGGGTTACATTCTCGTACACTGTTGTTGCTTTTAGTATTTGGTGTCCTGATGGTTGGTTGGCTAAACGTGGGGTTATTGATTTTGCTGGGGGATATGTTATTCACCTCTCTGCTGGAGTTGCTGGTTTCACTGCAGCTTATTGGGTGGGTCCTCGAGAAGAGAAGGACAGGGAAACATTTCCGGCAGAAGCAAACAACATGATAATGGTGGTTGCAGGCGCAGGACTGCTTTGGATGGGTTGGAGTGGATTCAACGGTGGAGCTCCATTTGTGGCTAGTACCATTGCTTCTCTTGCTGTCTTAAACACACACGTGTGTACTGCTGCTAGCATCATAGTATGGGTCATGCTCGATACCTTCTACTTTGGCAAACCCACTGTGTTTGGCGCCGTACAGGGCATGATCACCGGTCTCGTTTGCATTACACCTGCCGCAGGACTTGTGCAGGGGTGGGCAGCAATCTTGATGGGTTTTATATCAGGAAGTATTCCATGGTACACAATGATGGTACTCCACAACAAGGTTAATTTCTTAAAGAAAATTGACGATCCGATGGCGGTGTTCCACACTCATGCCATAGCTGGCGCTCTTGGCGGCATTCTCACTGGCTTCTTTGCCGTACCTAAACTATGTCGTCTCTTCTACATGGTGCCCGATTGGGAAAAATACATTGGCCTCGCCTATGGCCTACAAAATAAAGGCGCAACTCAAGCGGGTTTGAACCAGATGGTGATCCAAATTGAGGGCATAGTTTTTGTGATTTGCTACAATGTTGTCATGACAAGTTTGATTTGCTTGATTGTGAGGGTTATAGTACCACTTAGGCTTAATGGCGATGCGTTGCAAACGGGTGACAAGGCAATTCACGGAGAAGATGCTTTTGCCTTGCATAGTGAGGCAACTAAATTTGTGAACATTAAGCGCAATCAGATTTATGATACACAAGATTTCTTGTCGATTCCCGAGTCTAGATCATTAGGTGAACTTCAAATGGTATGA 1443 0.4477 MELPSNLLPDEASPEWMNKGDNAWQLTAATMVGLQSIPGLVILYGSLVKKTWAINSAFMAFYAFASVLLCWVSWAYHMSFGEKMVFFLGKPNVALDEKFLLGKAFLGNFPNSTMVFYQGVFAGLTLILIAGALLGRMNIRAWMLFVPLWVTFSYTVVAFSIWCPDGWLAKRGVIDFAGGYVIHLSAGVAGFTAAYWVGPREEKDRETFPAEANNMIMVVAGAGLLWMGWSGFNGGAPFVASTIASLAVLNTHVCTAASIIVWVMLDTFYFGKPTVFGAVQGMITGLVCITPAAGLVQGWAAILMGFISGSIPWYTMMVLHNKVNFLKKIDDPMAVFHTHAIAGALGGILTGFFAVPKLCRLFYMVPDWEKYIGLAYGLQNKGATQAGLNQMVIQIEGIVFVICYNVVMTSLICLIVRVIVPLRLNGDALQTGDKAIHGEDAFALHSEATKFVNIKRNQIYDTQDFLSIPESRSLGELQMV* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5017 480 Pfam Ammonium Transporter Family 23 441 IPR024041 GO:0008519|GO:0016020|GO:0072488
Mal3g5017 480 Gene3D Ammonium transporter AmtB like domains 7 460 IPR029020 -
Mal3g5017 480 TIGRFAM amt: ammonium transporter 21 441 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mal3g5017 480 SUPERFAMILY Ammonium transporter 16 424 - -
Mal3g5017 480 PANTHER AMMONIUM TRANSPORTER MEP2 1 480 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mal3g5017 480 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mal3g5017 480 PANTHER AMMONIUM TRANSPORTER 1 480 - -
Mal3g5017 480 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005887
Mal3g5017 480 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005887
Mal3g5017 480 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5017 Mal-Chr3 130227085 130229167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5017 112 470 Inorganic Solute Cotransporters AT2G38290 52.368 2.12e-123 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5017 K03320 - gmx:100782944 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g5017 3 130227085 130229167 Mal3g5017 3 130227085 130229167 ECH