Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5011 ATGGTTCCATCACTTTGTGCCAGTGGTTGTGGTTTCTATGGTTCTCCTTCAAACAAGAACCTTTGTTCAAAGTGTTACAATGTTTATCTCAAAGAAAACATTGTTAAGTCAAACGATGAAAACATTGTATTTGAGTCATCGTCTTCTTGTCCTTCAAAGAACCCTAATATTAATGATATTTGTGATGTCGTGACAGCTATTTCTCTCATTGACCATGAGAATATGAAGAAGAAAAATAGGTGCAGGAGTTGCAACAAAAAAGTGGGACTAACAGGGTTCAAGTGCCGTTGTGGTGATGTATTTTGTGGAATGCATAGATACCCAGAAGAACATACATGCAAAGTGGATTTAAAGGAGATTGGTCGCCAAATATTAGATAAACAAAATCCTTTATGTATGGGTGATAAGTTAGAACATCGGATCTAA 426 0.3615 MVPSLCASGCGFYGSPSNKNLCSKCYNVYLKENIVKSNDENIVFESSSSCPSKNPNINDICDVVTAISLIDHENMKKKNRCRSCNKKVGLTGFKCRCGDVFCGMHRYPEEHTCKVDLKEIGRQILDKQNPLCMGDKLEHRI* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5011 141 Gene3D - 63 135 IPR035896 -
Mal3g5011 141 ProSiteProfiles Zinc finger AN1-type profile. 75 121 IPR000058 GO:0008270
Mal3g5011 141 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 3 141 - -
Mal3g5011 141 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 50 - -
Mal3g5011 141 Gene3D - 1 61 - -
Mal3g5011 141 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 141 - -
Mal3g5011 141 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Mal3g5011 141 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Mal3g5011 141 SMART AN1_Zf_4 81 118 IPR000058 GO:0008270
Mal3g5011 141 Pfam AN1-like Zinc finger 81 115 IPR000058 GO:0008270
Mal3g5011 141 Pfam A20-like zinc finger 4 27 IPR002653 GO:0003677|GO:0008270
Mal3g5011 141 SUPERFAMILY AN1-like Zinc finger 74 135 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5011 Mal-Chr3 130158346 130158771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5011 5 138 C2H2 Transcription Factor Family AT3G52800 38.961 6.60e-27 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g5011 - - gmx:102666624 180.259