Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g5008 ATGGGGAAGGCAAGCAAATGGATTAGAAACCTTCTTCTAGGGAAAAAAGAAGAGAACTTCAAGCAGATTGATACATTCTGCCCCGAGAATAAGACCGCAAACACGGTTAATGGTAGTAGTAGCAGCAGTAGTAATAAGATGGTAGTGAAGCGCAGATGGAGCTTCCGAAAACTAACAAGTGGAAGATCAACAGGCAAGGTAGTAGCTCATAAAATTTCCAAGTCTTTTGACTCAGATGACTCTCCAAAATTGCAAATACAAGGCTTGTTCTATACTCAGTCCCCAAGGTTTCGTCCAACAGCTGCTGAATTTGTAAAAAAAGCTGCTACAAAGATTCAAGCTTCTTTTCGCTCCTATTTGGCAAGGAGAGCATTGCATGCTTTAAGAGGACTAGTGAAGTTACAGGCACTAGTGAGGGGTCACCTTGTAAGGAAACAAACAACTGCAACACTACGTGGAATGCATGCATTGATGTCGATACAAGTTAGAGCACGAATTAAAAGGATTAAGATGGCAGAAGAAGTAAATCCCCTCGAAATACAACAACCTCCACAACACACAGAAATTCCCTCCTTCAAAGGTCAAATGACACAACAAAAACAAAATCAAGATTCAAAGAATATGAGCATGGAAGAAATGTTGGAGGTTATGAGAAGTAGAAGCGGTCCACTAGATGTTAAAAGCAGAAAGTATGATTCAATGGCATATTATTCAAGAAGTCAATCAATTTCAAAACGAGAAAATCAATTGAAGAAGGAGAATCACAATAATAATAATAATAAACCTAGAACGATCCTTTCAGCACCAAACAGCCCAGAAAAGTACTATAGAGACATGATTGAATATTTGAATCCACCAACAACTGATCATGATACCTTATTATCAACATCTCAGCGCCACATAGTGGCTCCTAGAAAATCATGGTCATCATCACCAAGTTACATGAACAAGACAGAATCTTCAAGAGCAAAAACAAGGTCTAGTAGTGAACCAAGACAAAGACCTAAACAGGGAACAAAGCAACAAAACAATTCATTGAAGCAAAATATGTTCTCAAACTCAGCACGGTATGATCATTGGGTTGTTAATTCATTGAAGGAGAGTAACCGTGATTCCTTTGGTAGCTATACTCTTACTACTAGTGATGATTCCTACTACTCGTGA 1164 0.3857 MGKASKWIRNLLLGKKEENFKQIDTFCPENKTANTVNGSSSSSSNKMVVKRRWSFRKLTSGRSTGKVVAHKISKSFDSDDSPKLQIQGLFYTQSPRFRPTAAEFVKKAATKIQASFRSYLARRALHALRGLVKLQALVRGHLVRKQTTATLRGMHALMSIQVRARIKRIKMAEEVNPLEIQQPPQHTEIPSFKGQMTQQKQNQDSKNMSMEEMLEVMRSRSGPLDVKSRKYDSMAYYSRSQSISKRENQLKKENHNNNNNKPRTILSAPNSPEKYYRDMIEYLNPPTTDHDTLLSTSQRHIVAPRKSWSSSPSYMNKTESSRAKTRSSSEPRQRPKQGTKQQNNSLKQNMFSNSARYDHWVVNSLKESNRDSFGSYTLTTSDDSYYS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g5008 387 MobiDBLite consensus disorder prediction 299 353 - -
Mal3g5008 387 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Mal3g5008 387 MobiDBLite consensus disorder prediction 334 353 - -
Mal3g5008 387 Pfam Protein of unknown function (DUF4005) 272 364 IPR025064 -
Mal3g5008 387 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 355 - -
Mal3g5008 387 Gene3D - 102 158 - -
Mal3g5008 387 SMART iq_5 104 126 IPR000048 GO:0005515
Mal3g5008 387 SMART iq_5 127 148 IPR000048 GO:0005515
Mal3g5008 387 MobiDBLite consensus disorder prediction 237 271 - -
Mal3g5008 387 PANTHER IQ-DOMAIN 5-RELATED 1 355 - -
Mal3g5008 387 MobiDBLite consensus disorder prediction 299 322 - -
Mal3g5008 387 Pfam IQ calmodulin-binding motif 132 146 IPR000048 GO:0005515
Mal3g5008 387 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Mal3g5008 387 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Mal3g5008 387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 147 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g5008 Mal-Chr3 130122866 130124924 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g5008 1 342 IQD Protein Family AT4G14750 34.943 2.05e-35 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g5008 3 130122866 130124924 Mal3g5008 3 130122866 130124924 ECH